; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026951 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026951
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:18329617..18330479
RNA-Seq ExpressionPI0026951
SyntenyPI0026951
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]7.7e-5657.14Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM----------------------------------KVNEKDIEYISRLRPKIATILSRITKIHT
        V S  E+VGTSKTPV K AEQSLRP  LLE+I RGKM                                  K+     EYI RLRP+IAT+LS I KIH 
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM----------------------------------KVNEKDIEYISRLRPKIATILSRITKIHT

Query:  DNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIRER------------------------LSILSCEKN
        D LT LE+YLNSY KRVD+FNDVQSSY   LLSTDKTRQLN+KTS IKE LTL+ +LR DVKVI+ER                        LSILSCEK 
Subjt:  DNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIRER------------------------LSILSCEKN

Query:  EGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        E ID+++LEVAKLQDE NTLESTPAITEEA E LATV +SMEAA E+FKNFK
Subjt:  EGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

KAA0054406.1 hypothetical protein E6C27_scaffold24G001560 [Cucumis melo var. makuwa]8.8e-6061.9Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM-------------KVNEKDIEYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFN
        VDS +E+VGT  TPV+K AEQSLRP  LL++IRRGKM             K+     EYI RLRPKIAT+LS I KIH D+LTPLE+YLNSY KRVD+FN
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM-------------KVNEKDIEYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFN

Query:  DVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIR------------------------ERLSILSCEKNEGIDRKQLEVAKLQDEANTLE
        DVQSSY A LLSTDK RQL++KTS IKE LTLMDQLR D KVI+                        E+LSIL CEK E ID+++LEVAKL DE NTLE
Subjt:  DVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIR------------------------ERLSILSCEKNEGIDRKQLEVAKLQDEANTLE

Query:  STPAITEEATETLATVRKSMEAAHEQFKNFK
        STP ITEEA E LA VRKSME AHE+FKNFK
Subjt:  STPAITEEATETLATVRKSMEAAHEQFKNFK

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.5e-5449.67Show/hide
Query:  EFLTFQHHWASCVDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------
        E LT  H     VDSA E+VGTSKTPV K AEQSLRP  LLE+IR+ KM V  KD+                                            
Subjt:  EFLTFQHHWASCVDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------

Query:  --------------------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTST
                                        EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTS 
Subjt:  --------------------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTST

Query:  IKETLTLMDQLREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHE
        IKE LTL+ QLR D KVI+ER                        LSILSCEK E ID+++LEVAKLQDE NTLESTPAITEEA E LATVR+SMEAA E
Subjt:  IKETLTLMDQLREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHE

Query:  QFKNFK
        +FKNFK
Subjt:  QFKNFK

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]1.5e-5450Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------
        VDSA E+VGTSKTPV K AEQSLRP  LLE+IRRGKM V EKD+                                                        
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------

Query:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ
                              EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTS IKE LTL+ Q
Subjt:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ

Query:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        LR D KVI+ER                        LSILSCEK E ID+++LEVAKLQDE NTLESTPAI EEA E LAT+R+SMEA  E+FKNFK
Subjt:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]5.5e-5450Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------
        VDSA E+VGTSKTPV K AEQSLRP  L E+IRRGKM V  KD+                                                        
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------

Query:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ
                              EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTSTIKE LTL+ Q
Subjt:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ

Query:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        LR DVKVI+ER                        LSILSCEK E ID+++LEV  LQDE NTLESTPAIT+EA E LATVR+SMEAA E+FKNFK
Subjt:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

TrEMBL top hitse value%identityAlignment
A0A5A7TYW3 Uncharacterized protein3.7e-5657.14Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM----------------------------------KVNEKDIEYISRLRPKIATILSRITKIHT
        V S  E+VGTSKTPV K AEQSLRP  LLE+I RGKM                                  K+     EYI RLRP+IAT+LS I KIH 
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM----------------------------------KVNEKDIEYISRLRPKIATILSRITKIHT

Query:  DNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIRER------------------------LSILSCEKN
        D LT LE+YLNSY KRVD+FNDVQSSY   LLSTDKTRQLN+KTS IKE LTL+ +LR DVKVI+ER                        LSILSCEK 
Subjt:  DNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIRER------------------------LSILSCEKN

Query:  EGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        E ID+++LEVAKLQDE NTLESTPAITEEA E LATV +SMEAA E+FKNFK
Subjt:  EGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

A0A5A7UJE9 Uncharacterized protein4.3e-6061.9Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM-------------KVNEKDIEYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFN
        VDS +E+VGT  TPV+K AEQSLRP  LL++IRRGKM             K+     EYI RLRPKIAT+LS I KIH D+LTPLE+YLNSY KRVD+FN
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKM-------------KVNEKDIEYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFN

Query:  DVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIR------------------------ERLSILSCEKNEGIDRKQLEVAKLQDEANTLE
        DVQSSY A LLSTDK RQL++KTS IKE LTLMDQLR D KVI+                        E+LSIL CEK E ID+++LEVAKL DE NTLE
Subjt:  DVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIR------------------------ERLSILSCEKNEGIDRKQLEVAKLQDEANTLE

Query:  STPAITEEATETLATVRKSMEAAHEQFKNFK
        STP ITEEA E LA VRKSME AHE+FKNFK
Subjt:  STPAITEEATETLATVRKSMEAAHEQFKNFK

A0A5A7VHW8 PMD domain-containing protein1.2e-5449.67Show/hide
Query:  EFLTFQHHWASCVDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------
        E LT  H     VDSA E+VGTSKTPV K AEQSLRP  LLE+IR+ KM V  KD+                                            
Subjt:  EFLTFQHHWASCVDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------

Query:  --------------------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTST
                                        EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTS 
Subjt:  --------------------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTST

Query:  IKETLTLMDQLREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHE
        IKE LTL+ QLR D KVI+ER                        LSILSCEK E ID+++LEVAKLQDE NTLESTPAITEEA E LATVR+SMEAA E
Subjt:  IKETLTLMDQLREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHE

Query:  QFKNFK
        +FKNFK
Subjt:  QFKNFK

A0A5D3BW91 Uncharacterized protein7.0e-5550Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------
        VDSA E+VGTSKTPV K AEQSLRP  LLE+IRRGKM V EKD+                                                        
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------

Query:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ
                              EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTS IKE LTL+ Q
Subjt:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ

Query:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        LR D KVI+ER                        LSILSCEK E ID+++LEVAKLQDE NTLESTPAI EEA E LAT+R+SMEA  E+FKNFK
Subjt:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

A0A5D3C3D7 PMD domain-containing protein2.7e-5450Show/hide
Query:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------
        VDSA E+VGTSKTPV K AEQSLRP  L E+IRRGKM V  KD+                                                        
Subjt:  VDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDI--------------------------------------------------------

Query:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ
                              EYI RLRP+IAT+LS I KIH D LT LE+YLNSY KRVD+FNDVQSSY A LLSTDK RQLN+KTSTIKE LTL+ Q
Subjt:  ----------------------EYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFNDVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQ

Query:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK
        LR DVKVI+ER                        LSILSCEK E ID+++LEV  LQDE NTLESTPAIT+EA E LATVR+SMEAA E+FKNFK
Subjt:  LREDVKVIRER------------------------LSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCTGTGGAAGAGGCTCAAATGCTATGGGAGTTCCTAACGTTCCAACACCACTGGGCCTCATGTGTGGATTCAGCCCTTGAAAAAGTTGGTACCTCAAAGACACC
AGTTGCCAAACAAGCTGAACAATCCTTACGTCCTCCTGTTCTTCTCGAGAAGATTCGTCGAGGCAAGATGAAGGTGAATGAAAAAGACATTGAATATATCTCAAGACTTA
GACCGAAAATAGCAACGATCCTTTCGAGAATTACGAAGATCCATACAGATAATCTGACTCCTCTTGAAAAATATTTGAATAGCTACTTTAAGAGGGTAGACAGTTTCAAC
GATGTACAATCTTCATATTTCGCACATTTGTTGTCGACAGATAAAACTCGTCAATTGAACAAGAAGACATCTACCATCAAAGAAACTTTGACCTTGATGGACCAACTACG
AGAAGATGTCAAAGTTATTCGAGAGAGGCTATCCATCTTATCTTGTGAGAAAAATGAGGGCATAGATAGGAAACAACTAGAAGTTGCCAAGCTCCAAGACGAAGCCAACA
CTCTTGAAAGCACCCCTGCTATCACCGAAGAAGCCACTGAGACCCTGGCTACGGTTCGTAAAAGTATGGAGGCTGCACACGAACAATTCAAGAACTTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCTGTGGAAGAGGCTCAAATGCTATGGGAGTTCCTAACGTTCCAACACCACTGGGCCTCATGTGTGGATTCAGCCCTTGAAAAAGTTGGTACCTCAAAGACACC
AGTTGCCAAACAAGCTGAACAATCCTTACGTCCTCCTGTTCTTCTCGAGAAGATTCGTCGAGGCAAGATGAAGGTGAATGAAAAAGACATTGAATATATCTCAAGACTTA
GACCGAAAATAGCAACGATCCTTTCGAGAATTACGAAGATCCATACAGATAATCTGACTCCTCTTGAAAAATATTTGAATAGCTACTTTAAGAGGGTAGACAGTTTCAAC
GATGTACAATCTTCATATTTCGCACATTTGTTGTCGACAGATAAAACTCGTCAATTGAACAAGAAGACATCTACCATCAAAGAAACTTTGACCTTGATGGACCAACTACG
AGAAGATGTCAAAGTTATTCGAGAGAGGCTATCCATCTTATCTTGTGAGAAAAATGAGGGCATAGATAGGAAACAACTAGAAGTTGCCAAGCTCCAAGACGAAGCCAACA
CTCTTGAAAGCACCCCTGCTATCACCGAAGAAGCCACTGAGACCCTGGCTACGGTTCGTAAAAGTATGGAGGCTGCACACGAACAATTCAAGAACTTTAAGTGA
Protein sequenceShow/hide protein sequence
MIPVEEAQMLWEFLTFQHHWASCVDSALEKVGTSKTPVAKQAEQSLRPPVLLEKIRRGKMKVNEKDIEYISRLRPKIATILSRITKIHTDNLTPLEKYLNSYFKRVDSFN
DVQSSYFAHLLSTDKTRQLNKKTSTIKETLTLMDQLREDVKVIRERLSILSCEKNEGIDRKQLEVAKLQDEANTLESTPAITEEATETLATVRKSMEAAHEQFKNFK