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PI0026958 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026958
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:26630851..26631462
RNA-Seq ExpressionPI0026958
SyntenyPI0026958
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-6072.25Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNS+AG SS++FGQ YY+LG+DPSSSYMHGHGR   +HNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

KAA0050408.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.8e-6375.72Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GAVVGHLRSNNSRLR+VAN PQQ+L+ICN+NE+Y+ENI YMYDVPI   PVQRR A VQ+PD+LEEV+QHVEE+P + QTQSE S  SP+MMMS
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
         FGT Y D  VGQSS FGTGYYNSEA PSSSNFGQ YY+LG+DPSSSYMHGHGR H EHNEYLYY+ PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.8e-6173.41Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RL +VA+ PQQVL+ICNNNE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH EEVPP+ QT+SE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNSEAG SS++FGQ YY+LG+DPSSSYMHGHGR   EHNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-6375.14Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GAV+ HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH EEVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DSEVGQSS FG GYYNSEAG SS++FGQ YY+LG+DPSSSYMHGHGR   EHNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-6072.25Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNS+AG SS++FGQ YY+LG+DPSSSYMHGHGR   +HNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein6.9e-6172.25Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNS+AG SS++FGQ YY+LG+DPSSSYMHGHGR   +HNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.8e-6475.72Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GAVVGHLRSNNSRLR+VAN PQQ+L+ICN+NE+Y+ENI YMYDVPI   PVQRR A VQ+PD+LEEV+QHVEE+P + QTQSE S  SP+MMMS
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
         FGT Y D  VGQSS FGTGYYNSEA PSSSNFGQ YY+LG+DPSSSYMHGHGR H EHNEYLYY+ PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein1.8e-6173.41Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RL +VA+ PQQVL+ICNNNE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH EEVPP+ QT+SE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNSEAG SS++FGQ YY+LG+DPSSSYMHGHGR   EHNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-6375.14Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GAV+ HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH EEVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DSEVGQSS FG GYYNSEAG SS++FGQ YY+LG+DPSSSYMHGHGR   EHNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein6.9e-6172.25Show/hide
Query:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS
        LYIT+ GA + HLRSNN RLR+VA+ PQQVL+ICN+NE+Y+ENI YMYDVPIVP PVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE +  SP+MMM 
Subjt:  LYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMS

Query:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE
        TFGT Y DS VGQSS FG GYYNS+AG SS++FGQ YY+LG+DPSSSYMHGHGR   +HNEYLYYE PA V E
Subjt:  TFGTGYNDSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCACTCTATATCACTCGACTGGGAGCTGTTGTGGGTCATCTGAGATCAAACAATAGTAGACTTCGAGATGTTGCAAATGTTCCACAGCAGGTCCTAGATATATG
CAACAATAACGAGCGGTACATAGAGAACATACAATATATGTACGATGTACCTATTGTACCTACACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGG
AAGAAGTTGAACAGCACGTGGAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGAGACTAGTGACGCTAGTCCAATGATGATGATGTCGACATTTGGAACGGGATATAAT
GATTCAGAAGTCGGTCAATCGTCACACTTCGGAACAGGATATTATAATTCAGAGGCAGGTCCATCATCATCAAACTTTGGACAAGGATACTACAATTTAGGAACCGATCC
ATCATCTTCATACATGCATGGACATGGGCGTGATCATGAAGAACATAACGAATATTTGTACTATGAAGCGCCTGCAGTGGTACTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTACCACTCTATATCACTCGACTGGGAGCTGTTGTGGGTCATCTGAGATCAAACAATAGTAGACTTCGAGATGTTGCAAATGTTCCACAGCAGGTCCTAGATATATG
CAACAATAACGAGCGGTACATAGAGAACATACAATATATGTACGATGTACCTATTGTACCTACACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGG
AAGAAGTTGAACAGCACGTGGAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGAGACTAGTGACGCTAGTCCAATGATGATGATGTCGACATTTGGAACGGGATATAAT
GATTCAGAAGTCGGTCAATCGTCACACTTCGGAACAGGATATTATAATTCAGAGGCAGGTCCATCATCATCAAACTTTGGACAAGGATACTACAATTTAGGAACCGATCC
ATCATCTTCATACATGCATGGACATGGGCGTGATCATGAAGAACATAACGAATATTTGTACTATGAAGCGCCTGCAGTGGTACTCGAGTGA
Protein sequenceShow/hide protein sequence
MLPLYITRLGAVVGHLRSNNSRLRDVANVPQQVLDICNNNERYIENIQYMYDVPIVPTPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSETSDASPMMMMSTFGTGYN
DSEVGQSSHFGTGYYNSEAGPSSSNFGQGYYNLGTDPSSSYMHGHGRDHEEHNEYLYYEAPAVVLE