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PI0026961 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026961
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr10:13379739..13381118
RNA-Seq ExpressionPI0026961
SyntenyPI0026961
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05279.1 uncharacterized protein E5676_scaffold108G00960 [Cucumis melo var. makuwa]1.2e-0756.36Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        + IT K GR+KIP N+P+V IDG+ F L +NV + K V+Q RIA+E N+ DKHHS
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

TYK27163.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]1.4e-0854.39Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM
        K IT K G RK+PPN+P++ IDG+ F L ++VH+ K VVQ R A+E N+ DKHHS +
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM

XP_008450214.1 PREDICTED: uncharacterized protein LOC103491875 [Cucumis melo]5.2e-0846.05Show/hide
Query:  TSSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM
        +S  P +  P+     +  + IT K GR+KIPPN+P+V IDG+ F   +NV +LK +VQ R+A E NV DKH S M
Subjt:  TSSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM

XP_008454699.1 PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo]3.6e-0950.68Show/hide
Query:  SSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        SS P    P      +  + IT KAGR+KIP N+P+V IDG+ F L +N+H+ K VVQ RIA+E N+ DKHHS
Subjt:  SSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

XP_008454855.1 PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]6.9e-0856.36Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        + IT K GR+KIP N+P+V IDG+FF L +NV   K ++Q RIA+E N+ DKHHS
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

TrEMBL top hitse value%identityAlignment
A0A1S3BN53 uncharacterized protein LOC1034918752.5e-0846.05Show/hide
Query:  TSSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM
        +S  P +  P+     +  + IT K GR+KIPPN+P+V IDG+ F   +NV +LK +VQ R+A E NV DKH S M
Subjt:  TSSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM

A0A1S3BZ31 uncharacterized protein LOC1034951623.3e-0856.36Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        + IT K GR+KIP N+P+V IDG+FF L +NV   K ++Q RIA+E N+ DKHHS
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

A0A1S3C0F4 uncharacterized protein LOC1034950531.8e-0950.68Show/hide
Query:  SSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        SS P    P      +  + IT KAGR+KIP N+P+V IDG+ F L +N+H+ K VVQ RIA+E N+ DKHHS
Subjt:  SSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

A0A5A7UQ31 Uncharacterized protein3.3e-0856.36Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS
        + IT K GR+KIP N+P+V IDG+FF L +NV   K ++Q RIA+E N+ DKHHS
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHS

A0A5D3DU39 Cell wall protein RBR3-like6.7e-0954.39Show/hide
Query:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM
        K IT K G RK+PPN+P++ IDG+ F L ++VH+ K VVQ R A+E N+ DKHHS +
Subjt:  KRITAKAGRRKIPPNVPAVLIDGVFFSLRKNVHKLKIVVQYRIANEYNVFDKHHSLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGCGATTCAGGGCGGTTAAGGTGCACAAACCCCTTCGAAAGGGAGTTTGGGGGTACGCGACCAATTTTAGAATGACTTTCAAACAAAGATTCTCAATAGTGAT
CAGAAACGACATTGCTTCGTGTGGTCCAGCATACTACGTCAGTGTTAATGCTTTAGGTGCTGTTTACTCTAGTCACATTGATTTACCATCTACTAATGTTACTTCGAATG
TTGATCATGTAGTTGATCCCAATGTCAATAACAAGAGTACTAACATTGGTAGGTCTTTGACTGAATGTGTTGTTAAGGGTATATCTGTTATTGGGTTGTCTAATGTTAAT
GTTTCCACCTTGGACTCTACTGATGATTTGATTACTACAACTAAGTCTCCTATTGATGACGATCTTGTTTCCATATCCTCGGATGATAATTTGTCCTTGCTCATTTGGTC
AAGCGTTTGTAAGAAGTCTGTTGATCACTCAGACTCTGCCTGTGACAAGCTACCATTCTCCACAGAGAAGGTCTCTATGACTTCTTCTCGCCCTAATTCATCTTCTCCAG
TTACAGCTGCTCCTTGCAAAGGCCTTAAACGTATTACTGCCAAGGCTGGCCGTCGAAAAATTCCTCCTAATGTTCCAGCAGTTCTCATTGATGGTGTTTTTTTCTCACTG
CGAAAAAATGTGCACAAATTGAAAATTGTTGTTCAATATCGGATTGCTAATGAATATAATGTTTTTGACAAACATCACTCTTTGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGCGATTCAGGGCGGTTAAGGTGCACAAACCCCTTCGAAAGGGAGTTTGGGGGTACGCGACCAATTTTAGAATGACTTTCAAACAAAGATTCTCAATAGTGAT
CAGAAACGACATTGCTTCGTGTGGTCCAGCATACTACGTCAGTGTTAATGCTTTAGGTGCTGTTTACTCTAGTCACATTGATTTACCATCTACTAATGTTACTTCGAATG
TTGATCATGTAGTTGATCCCAATGTCAATAACAAGAGTACTAACATTGGTAGGTCTTTGACTGAATGTGTTGTTAAGGGTATATCTGTTATTGGGTTGTCTAATGTTAAT
GTTTCCACCTTGGACTCTACTGATGATTTGATTACTACAACTAAGTCTCCTATTGATGACGATCTTGTTTCCATATCCTCGGATGATAATTTGTCCTTGCTCATTTGGTC
AAGCGTTTGTAAGAAGTCTGTTGATCACTCAGACTCTGCCTGTGACAAGCTACCATTCTCCACAGAGAAGGTCTCTATGACTTCTTCTCGCCCTAATTCATCTTCTCCAG
TTACAGCTGCTCCTTGCAAAGGCCTTAAACGTATTACTGCCAAGGCTGGCCGTCGAAAAATTCCTCCTAATGTTCCAGCAGTTCTCATTGATGGTGTTTTTTTCTCACTG
CGAAAAAATGTGCACAAATTGAAAATTGTTGTTCAATATCGGATTGCTAATGAATATAATGTTTTTGACAAACATCACTCTTTGATGTAA
Protein sequenceShow/hide protein sequence
MIERFRAVKVHKPLRKGVWGYATNFRMTFKQRFSIVIRNDIASCGPAYYVSVNALGAVYSSHIDLPSTNVTSNVDHVVDPNVNNKSTNIGRSLTECVVKGISVIGLSNVN
VSTLDSTDDLITTTKSPIDDDLVSISSDDNLSLLIWSSVCKKSVDHSDSACDKLPFSTEKVSMTSSRPNSSSPVTAAPCKGLKRITAKAGRRKIPPNVPAVLIDGVFFSL
RKNVHKLKIVVQYRIANEYNVFDKHHSLM