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PI0027010 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027010
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:7623137..7625241
RNA-Seq ExpressionPI0027010
SyntenyPI0027010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043382.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.1e-1235.63Show/hide
Query:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRT---VFVHAKEASVKETERGIVQ----EDKLTNLNRLG
        TLK ELK  R  FE LSKS ++++ GT  LD +L  GK   DKRG+GFS         G+ RT   VFVH  E++  + +R I +    ED   ++  L 
Subjt:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRT---VFVHAKEASVKETERGIVQ----EDKLTNLNRLG

Query:  KHKRKWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRD-DRCNMAFPSIHASNT
        + KR W+C+FCG+ GHI  + Y L  Q     K V    + +N      ++ W+ K + + C +A  S++  N+
Subjt:  KHKRKWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRD-DRCNMAFPSIHASNT

KAA0045252.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.6e-0926.74Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+LK++LK V+ +++   KS ++L+ GT++LD +L  G+ G+++ G+GF +T  + +++    T  ++   ASV +    ++     T +        
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQ--HAYVNKNVGKDFRRLNSKQG---NSKSFWQMKRDDRCNMAFPSIHAS
        KW+CH+CG+  HI  F Y L     + +  K+  + ++   +KQ     S+  W +K+  +CN+ F S+  +
Subjt:  KWVCHFCGRPGHICLFYYHLLDQ--HAYVNKNVGKDFRRLNSKQG---NSKSFWQMKRDDRCNMAFPSIHAS

KAA0054893.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.5e-1234.12Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+LK++LK V+  ++ + K  ++L+FGT +LDS+L  G+ G  K G+GF +T  +GV      T  V    ASVKET        K   +N   K  R
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNV---GKDFRRLNSKQGNSKS---FWQMKRDDRCNMAFPSI
         WVC++CG+ GH   F Y LL    +  K+     ++ RRL  +  N +     W++K  ++CN+AF ++
Subjt:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNV---GKDFRRLNSKQGNSKS---FWQMKRDDRCNMAFPSI

KAA0056382.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.2e-1030.59Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+ K++L+ V+ +++   KS ++L+  T SLDS+L   + G  K G+ F  + +    +   R V    KE +    E  I   D        GK  R
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKD------FRRLNSKQGNSKSFWQMKRDDRCNMAFPSI
         WVC++CGR GHI  F Y LL   +Y  K+  K+      F + N+    +   W++K  + CN+AF +I
Subjt:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKD------FRRLNSKQGNSKSFWQMKRDDRCNMAFPSI

KAA0061122.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.2e-1134.81Show/hide
Query:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDK-LTNLNRLGKHKRKW
        TLK ELK  +  FE L+K  ++L+ GT+ LD ++  GK   DKRG+ FS   ++G++    +T+FV  +     E E G V+  K +    R    +++ 
Subjt:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDK-LTNLNRLGKHKRKW

Query:  VCHFCGRPGHI---------CLFYYHLLDQHAYVN
        VCHFCG+ GHI          +F+ H + Q+ Y+N
Subjt:  VCHFCGRPGHI---------CLFYYHLLDQHAYVN

TrEMBL top hitse value%identityAlignment
A0A5A7TJC1 Gag-pol polyprotein5.4e-1335.63Show/hide
Query:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRT---VFVHAKEASVKETERGIVQ----EDKLTNLNRLG
        TLK ELK  R  FE LSKS ++++ GT  LD +L  GK   DKRG+GFS         G+ RT   VFVH  E++  + +R I +    ED   ++  L 
Subjt:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRT---VFVHAKEASVKETERGIVQ----EDKLTNLNRLG

Query:  KHKRKWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRD-DRCNMAFPSIHASNT
        + KR W+C+FCG+ GHI  + Y L  Q     K V    + +N      ++ W+ K + + C +A  S++  N+
Subjt:  KHKRKWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRD-DRCNMAFPSIHASNT

A0A5A7TPF7 Gag-proteinase polyprotein1.2e-0926.74Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+LK++LK V+ +++   KS ++L+ GT++LD +L  G+ G+++ G+GF +T  + +++    T  ++   ASV +    ++     T +        
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQ--HAYVNKNVGKDFRRLNSKQG---NSKSFWQMKRDDRCNMAFPSIHAS
        KW+CH+CG+  HI  F Y L     + +  K+  + ++   +KQ     S+  W +K+  +CN+ F S+  +
Subjt:  KWVCHFCGRPGHICLFYYHLLDQ--HAYVNKNVGKDFRRLNSKQG---NSKSFWQMKRDDRCNMAFPSIHAS

A0A5A7UKN4 Gag-pol polyprotein2.5e-1030.59Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+ K++L+ V+ +++   KS ++L+  T SLDS+L   + G  K G+ F  + +    +   R V    KE +    E  I   D        GK  R
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKD------FRRLNSKQGNSKSFWQMKRDDRCNMAFPSI
         WVC++CGR GHI  F Y LL   +Y  K+  K+      F + N+    +   W++K  + CN+AF +I
Subjt:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNVGKD------FRRLNSKQGNSKSFWQMKRDDRCNMAFPSI

A0A5D3BVP0 Gag-pol polyprotein6.0e-1234.81Show/hide
Query:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDK-LTNLNRLGKHKRKW
        TLK ELK  +  FE L+K  ++L+ GT+ LD ++  GK   DKRG+ FS   ++G++    +T+FV  +     E E G V+  K +    R    +++ 
Subjt:  TLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDK-LTNLNRLGKHKRKW

Query:  VCHFCGRPGHI---------CLFYYHLLDQHAYVN
        VCHFCG+ GHI          +F+ H + Q+ Y+N
Subjt:  VCHFCGRPGHI---------CLFYYHLLDQHAYVN

A0A5D3CI39 Gag-pol polyprotein1.2e-1234.12Show/hide
Query:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR
        ++S+LK++LK V+  ++ + K  ++L+FGT +LDS+L  G+ G  K G+GF +T  +GV      T  V    ASVKET        K   +N   K  R
Subjt:  MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKR

Query:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNV---GKDFRRLNSKQGNSKS---FWQMKRDDRCNMAFPSI
         WVC++CG+ GH   F Y LL    +  K+     ++ RRL  +  N +     W++K  ++CN+AF ++
Subjt:  KWVCHFCGRPGHICLFYYHLLDQHAYVNKNV---GKDFRRLNSKQGNSKS---FWQMKRDDRCNMAFPSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCCACTCTGAAAATTGAGTTGAAAGTTGTTCGTATGGACTTTGAATCCCTATCCAAGTCAGCAAGGATTCTAAGTTTCGGCACACAAAGTCTGGACAGTGTTTT
AAAAGTCGGTAAGATTGGGATGGACAAAAGAGGTATAGGATTCTCTAATACTGATCAACAGGGAGTATCCAGTGGACACACGAGAACTGTGTTTGTTCATGCCAAGGAAG
CTAGTGTCAAAGAAACGGAGAGAGGAATTGTTCAAGAGGATAAGTTAACTAACCTAAACAGGCTAGGAAAGCATAAGAGGAAGTGGGTGTGCCACTTCTGTGGGAGACCT
GGACATATTTGTCTCTTTTATTATCATTTGCTTGATCAACATGCTTACGTCAACAAGAACGTGGGCAAAGATTTTAGGAGGCTCAATTCAAAACAAGGAAATTCTAAGTC
TTTTTGGCAAATGAAAAGAGATGACAGGTGTAATATGGCTTTTCCATCCATTCATGCCTCGAATACTGAGGCTATAGTGGTTCCACCAGCTAATAGCTTGAAGAATAAAT
CTGAAGACACCAACCAGTCTGATTCTGCAGTTGTTCCTATTGGGTCCTCGTTTGCTTATGTTCTGATCTGTCAAGTAGTACTATTGGCGAGATCTAGAGTGGGATCACGA
CTCGTAAGAAGAAATGAATGGACTATGCCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCCACTCTGAAAATTGAGTTGAAAGTTGTTCGTATGGACTTTGAATCCCTATCCAAGTCAGCAAGGATTCTAAGTTTCGGCACACAAAGTCTGGACAGTGTTTT
AAAAGTCGGTAAGATTGGGATGGACAAAAGAGGTATAGGATTCTCTAATACTGATCAACAGGGAGTATCCAGTGGACACACGAGAACTGTGTTTGTTCATGCCAAGGAAG
CTAGTGTCAAAGAAACGGAGAGAGGAATTGTTCAAGAGGATAAGTTAACTAACCTAAACAGGCTAGGAAAGCATAAGAGGAAGTGGGTGTGCCACTTCTGTGGGAGACCT
GGACATATTTGTCTCTTTTATTATCATTTGCTTGATCAACATGCTTACGTCAACAAGAACGTGGGCAAAGATTTTAGGAGGCTCAATTCAAAACAAGGAAATTCTAAGTC
TTTTTGGCAAATGAAAAGAGATGACAGGTGTAATATGGCTTTTCCATCCATTCATGCCTCGAATACTGAGGCTATAGTGGTTCCACCAGCTAATAGCTTGAAGAATAAAT
CTGAAGACACCAACCAGTCTGATTCTGCAGTTGTTCCTATTGGGTCCTCGTTTGCTTATGTTCTGATCTGTCAAGTAGTACTATTGGCGAGATCTAGAGTGGGATCACGA
CTCGTAAGAAGAAATGAATGGACTATGCCAAGATGA
Protein sequenceShow/hide protein sequence
MMSTLKIELKVVRMDFESLSKSARILSFGTQSLDSVLKVGKIGMDKRGIGFSNTDQQGVSSGHTRTVFVHAKEASVKETERGIVQEDKLTNLNRLGKHKRKWVCHFCGRP
GHICLFYYHLLDQHAYVNKNVGKDFRRLNSKQGNSKSFWQMKRDDRCNMAFPSIHASNTEAIVVPPANSLKNKSEDTNQSDSAVVPIGSSFAYVLICQVVLLARSRVGSR
LVRRNEWTMPR