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PI0027025 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027025
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSignal recognition particle 9 kDa protein
Genome locationchr05:19387439..19389869
RNA-Seq ExpressionPI0027025
SyntenyPI0027025
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0045900 - negative regulation of translational elongation (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR008832 - Signal recognition particle, SRP9 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit
IPR039432 - SRP9 domain
IPR039914 - Signal recognition particle SRP9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571487.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5198.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_004154105.1 signal recognition particle 9 kDa protein [Cucumis sativus]1.0e-5099.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022963515.1 signal recognition particle 9 kDa protein [Cucurbita moschata]2.7e-5199.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022967500.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima]1.0e-5098.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKL+NIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_038887366.1 signal recognition particle 9 kDa protein [Benincasa hispida]6.0e-5198.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVY+ASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ2 Signal recognition particle 9 kDa protein5.0e-5199.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A1S3BLU0 Signal recognition particle 9 kDa protein5.0e-5199.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A5D3E2L2 Signal recognition particle 9 kDa protein5.0e-5199.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1HI87 Signal recognition particle 9 kDa protein1.3e-5199.03Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1HSA1 Signal recognition particle 9 kDa protein5.0e-5198.06Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKL+NIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

SwissProt top hitse value%identityAlignment
O04438 Signal recognition particle 9 kDa protein2.0e-4481.55Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVY+ SW+EFVERSVQLFR DPN+TRY +KYRHC+GKLVLKVTD+RECLKFKTDQAQDAKKMEKLNNIFF LM RGPDVDISEV+GK+Q + Q  KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        R+Q
Subjt:  RKQ

P21262 Signal recognition particle 9 kDa protein1.5e-1245.21Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM
        M    +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL ++TDQAQD KK+EK ++    LM
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM

P49458 Signal recognition particle 9 kDa protein1.5e-1248.53Show/hide
Query:  SWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM
        +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL +KTDQAQD KK+EK ++    LM
Subjt:  SWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM

Q55GL2 Signal recognition particle 9 kDa protein3.8e-1649.3Show/hide
Query:  VYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL
        +YI  WDEF ++S QL+R+DP  TR++ K+RH +GK+VLKVT++   LKF+TD+  D K+++++N++FF L
Subjt:  VYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL

Q9SMU7 Signal recognition particle 9 kDa protein3.8e-4887.38Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGPDVD+SEVTGK+Q++ QP KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

Arabidopsis top hitse value%identityAlignment
AT3G49100.1 Signal recognition particle, SRP9/SRP14 subunit2.7e-4987.38Show/hide
Query:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGPDVD+SEVTGK+Q++ QP KKGRG
Subjt:  MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTATTCCGTTCCGATCCCAACTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAA
ACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTTAACAACATATTCTTTACTCTGATGG
CCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTATTCCGTTCCGATCCCAACTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAA
ACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTTAACAACATATTCTTTACTCTGATGG
CCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA
Protein sequenceShow/hide protein sequence
MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ