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PI0027038 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027038
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:5862921..5864818
RNA-Seq ExpressionPI0027038
SyntenyPI0027038
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0043229 - intracellular organelle (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057384.1 hypothetical protein E6C27_scaffold280G002530 [Cucumis melo var. makuwa]2.5e-2450.89Show/hide
Query:  TWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEED
        +WW++ VQ RW GY FMEK R LK + + WN EVF DI  K K+I  RI+KIDA EL+     +L  ER  LK +  E+I+ EN+SWN+K+K+KWAK   
Subjt:  TWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEED

Query:  CNTSFFHRVVSG
        C+T FF+R  +G
Subjt:  CNTSFFHRVVSG

TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]1.1e-3536.78Show/hide
Query:  MEALKLADKIMVKVEA-----GSKKISPVIKNLL---------IGQTRESPSHSYPVVSLVGITSQGYSGCAVPFSAVFSFGEEWPMLDPMLYARVVDSG
        +++LKL D  M  +E+     GSK  SP+ KN L         +G ++       P +     T  GY GCA+P S+V+S G+   + + + +A  V SG
Subjt:  MEALKLADKIMVKVEA-----GSKKISPVIKNLL---------IGQTRESPSHSYPVVSLVGITSQGYSGCAVPFSAVFSFGEEWPMLDPMLYARVVDSG

Query:  VP---LSNDGFAGESLCHQNLIDNQVSTPCDNKVDEQWEAFASVGSNKVEVKRDKAGNGLKERVVKE----------GGVKTWWNV--------------
        V    L NDG +G  +        +  +   ++  ++ + F + GS K   +      G +E + KE          GGV   +NV              
Subjt:  VP---LSNDGFAGESLCHQNLIDNQVSTPCDNKVDEQWEAFASVGSNKVEVKRDKAGNGLKERVVKE----------GGVKTWWNV--------------

Query:  -------------------PVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVS
                            V  RW GYRFM+K R L  Q + WN++VF DI  KKK++ ARI +IDALELEG L +AL EER S KG+LAE+IRKENVS
Subjt:  -------------------PVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVS

Query:  WNQKSKIKWAKEEDCNTSFFHRVVSGRKN
        W+QKSKIKW KE DCN SFFHR  + R+N
Subjt:  WNQKSKIKWAKEEDCNTSFFHRVVSGRKN

TYK04731.1 UHRF1-binding protein 1-like protein [Cucumis melo var. makuwa]5.3e-2259.6Show/hide
Query:  MEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEEDCNTSFFHRVVSGRKN
        M K R L+G  K WN++VF DI  +KK+I  RI++I  LEL G L  +L  ER  LK    ELIRKENVSWN+K+KIKW KE DCNTSFFHRV S RK+
Subjt:  MEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEEDCNTSFFHRVVSGRKN

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]2.4e-2245.22Show/hide
Query:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE
        K WW       W GY+F  + R +K + K WNKEVF D++F KK+  ARI  +D +E +G L N L +ER  L   +++L+ KE V W Q+ KI+WA++ 
Subjt:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE

Query:  DCNTSFFHRVVSGRK
        D NT FFHR+ SGR+
Subjt:  DCNTSFFHRVVSGRK

XP_020420593.1 uncharacterized protein LOC18774736 [Prunus persica]1.2e-2144.35Show/hide
Query:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE
        K WW       W GY+F  + R +K + K WNKEVF D++  KK+  ARI  +D +E +G L N L +ER  L   +++L+ KE V W Q+ KI+WA++ 
Subjt:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE

Query:  DCNTSFFHRVVSGRK
        D NT FFHR+ SGR+
Subjt:  DCNTSFFHRVVSGRK

TrEMBL top hitse value%identityAlignment
A0A5A7UQK0 Uncharacterized protein1.2e-2450.89Show/hide
Query:  TWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEED
        +WW++ VQ RW GY FMEK R LK + + WN EVF DI  K K+I  RI+KIDA EL+     +L  ER  LK +  E+I+ EN+SWN+K+K+KWAK   
Subjt:  TWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEED

Query:  CNTSFFHRVVSG
        C+T FF+R  +G
Subjt:  CNTSFFHRVVSG

A0A5D3BW32 Uncharacterized protein5.3e-3636.78Show/hide
Query:  MEALKLADKIMVKVEA-----GSKKISPVIKNLL---------IGQTRESPSHSYPVVSLVGITSQGYSGCAVPFSAVFSFGEEWPMLDPMLYARVVDSG
        +++LKL D  M  +E+     GSK  SP+ KN L         +G ++       P +     T  GY GCA+P S+V+S G+   + + + +A  V SG
Subjt:  MEALKLADKIMVKVEA-----GSKKISPVIKNLL---------IGQTRESPSHSYPVVSLVGITSQGYSGCAVPFSAVFSFGEEWPMLDPMLYARVVDSG

Query:  VP---LSNDGFAGESLCHQNLIDNQVSTPCDNKVDEQWEAFASVGSNKVEVKRDKAGNGLKERVVKE----------GGVKTWWNV--------------
        V    L NDG +G  +        +  +   ++  ++ + F + GS K   +      G +E + KE          GGV   +NV              
Subjt:  VP---LSNDGFAGESLCHQNLIDNQVSTPCDNKVDEQWEAFASVGSNKVEVKRDKAGNGLKERVVKE----------GGVKTWWNV--------------

Query:  -------------------PVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVS
                            V  RW GYRFM+K R L  Q + WN++VF DI  KKK++ ARI +IDALELEG L +AL EER S KG+LAE+IRKENVS
Subjt:  -------------------PVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVS

Query:  WNQKSKIKWAKEEDCNTSFFHRVVSGRKN
        W+QKSKIKW KE DCN SFFHR  + R+N
Subjt:  WNQKSKIKWAKEEDCNTSFFHRVVSGRKN

A0A5D3BYG6 UHRF1-binding protein 1-like protein2.6e-2259.6Show/hide
Query:  MEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEEDCNTSFFHRVVSGRKN
        M K R L+G  K WN++VF DI  +KK+I  RI++I  LEL G L  +L  ER  LK    ELIRKENVSWN+K+KIKW KE DCNTSFFHRV S RK+
Subjt:  MEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEEDCNTSFFHRVVSGRKN

A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)1.1e-2245.22Show/hide
Query:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE
        K WW       W GY+F  + R +K + K WNKEVF D++F KK+  ARI  +D +E +G L N L +ER  L   +++L+ KE V W Q+ KI+WA++ 
Subjt:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE

Query:  DCNTSFFHRVVSGRK
        D NT FFHR+ SGR+
Subjt:  DCNTSFFHRVVSGRK

M5W647 Reverse transcriptase domain-containing protein (Fragment)5.7e-2244.35Show/hide
Query:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE
        K WW       W GY+F  + R +K + K WNKEVF D++  KK+  ARI  +D +E +G L N L +ER  L   +++L+ KE V W Q+ KI+WA++ 
Subjt:  KTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALNEERFSLKGNLAELIRKENVSWNQKSKIKWAKEE

Query:  DCNTSFFHRVVSGRK
        D NT FFHR+ SGR+
Subjt:  DCNTSFFHRVVSGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTGAAGTTGGCTGATAAGATTATGGTGAAAGTGGAAGCTGGAAGTAAGAAAATTTCGCCTGTGATAAAAAATTTGCTTATTGGGCAGACAAGGGAGTCACC
TTCCCACTCCTACCCAGTGGTAAGTTTGGTTGGCATTACAAGCCAGGGTTATTCGGGTTGTGCCGTACCCTTTTCGGCTGTGTTTTCTTTTGGAGAGGAGTGGCCAATGC
TTGATCCAATGTTATATGCTAGGGTTGTTGACTCAGGAGTGCCTCTATCCAATGATGGTTTTGCTGGGGAGTCTTTATGCCATCAAAACCTTATTGATAACCAGGTTTCC
ACTCCTTGTGATAATAAAGTGGATGAACAGTGGGAGGCATTTGCCTCGGTTGGGAGTAACAAAGTTGAGGTCAAGAGAGACAAAGCGGGAAATGGGTTAAAGGAGAGGGT
AGTGAAGGAAGGAGGGGTTAAGACTTGGTGGAATGTCCCTGTTCAAGAAAGATGGGCGGGCTATCGGTTTATGGAAAAGTTTAGAGTTTTAAAAGGTCAGTATAAAGGGT
GGAATAAAGAGGTTTTTGATGATATCATGTTTAAAAAGAAGAAGATTACGGCTAGGATTGACAAGATTGATGCTTTAGAGTTAGAAGGCTCCTTGGGTAATGCTCTTAAT
GAGGAAAGGTTTAGCTTAAAAGGGAACCTTGCTGAGTTGATTAGGAAGGAAAATGTTAGCTGGAACCAAAAGTCTAAAATCAAATGGGCTAAAGAAGAGGATTGTAATAC
TAGTTTTTTTCATAGAGTGGTGAGTGGTAGAAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTGAAGTTGGCTGATAAGATTATGGTGAAAGTGGAAGCTGGAAGTAAGAAAATTTCGCCTGTGATAAAAAATTTGCTTATTGGGCAGACAAGGGAGTCACC
TTCCCACTCCTACCCAGTGGTAAGTTTGGTTGGCATTACAAGCCAGGGTTATTCGGGTTGTGCCGTACCCTTTTCGGCTGTGTTTTCTTTTGGAGAGGAGTGGCCAATGC
TTGATCCAATGTTATATGCTAGGGTTGTTGACTCAGGAGTGCCTCTATCCAATGATGGTTTTGCTGGGGAGTCTTTATGCCATCAAAACCTTATTGATAACCAGGTTTCC
ACTCCTTGTGATAATAAAGTGGATGAACAGTGGGAGGCATTTGCCTCGGTTGGGAGTAACAAAGTTGAGGTCAAGAGAGACAAAGCGGGAAATGGGTTAAAGGAGAGGGT
AGTGAAGGAAGGAGGGGTTAAGACTTGGTGGAATGTCCCTGTTCAAGAAAGATGGGCGGGCTATCGGTTTATGGAAAAGTTTAGAGTTTTAAAAGGTCAGTATAAAGGGT
GGAATAAAGAGGTTTTTGATGATATCATGTTTAAAAAGAAGAAGATTACGGCTAGGATTGACAAGATTGATGCTTTAGAGTTAGAAGGCTCCTTGGGTAATGCTCTTAAT
GAGGAAAGGTTTAGCTTAAAAGGGAACCTTGCTGAGTTGATTAGGAAGGAAAATGTTAGCTGGAACCAAAAGTCTAAAATCAAATGGGCTAAAGAAGAGGATTGTAATAC
TAGTTTTTTTCATAGAGTGGTGAGTGGTAGAAAGAACTAG
Protein sequenceShow/hide protein sequence
MEALKLADKIMVKVEAGSKKISPVIKNLLIGQTRESPSHSYPVVSLVGITSQGYSGCAVPFSAVFSFGEEWPMLDPMLYARVVDSGVPLSNDGFAGESLCHQNLIDNQVS
TPCDNKVDEQWEAFASVGSNKVEVKRDKAGNGLKERVVKEGGVKTWWNVPVQERWAGYRFMEKFRVLKGQYKGWNKEVFDDIMFKKKKITARIDKIDALELEGSLGNALN
EERFSLKGNLAELIRKENVSWNQKSKIKWAKEEDCNTSFFHRVVSGRKN