; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027065 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027065
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationchr07:21781510..21783847
RNA-Seq ExpressionPI0027065
SyntenyPI0027065
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146043.1 uncharacterized protein At4g28440 [Cucumis sativus]4.7e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQTNAA +PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIELA+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

XP_008463705.1 PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo]2.1e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQTNAAA+PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+A+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

XP_022139613.1 uncharacterized protein At4g28440-like [Momordica charantia]1.9e-6989.61Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPAS E+QQ+NA A+PGLRKPVFVK+EQLKPGTNGHTL V+VV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIEL EP +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

XP_023535412.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]9.9e-6687.66Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MAT KSPTPAS          + GLRKPVFVK+EQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ EPE+FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

XP_038899654.1 uncharacterized protein At4g28440-like [Benincasa hispida]1.6e-7698.05Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQ+NAAA+PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L242 Uncharacterized protein2.3e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQTNAA +PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIELA+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

A0A1S3CKC4 uncharacterized protein At4g28440-like1.0e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQTNAAA+PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+A+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

A0A5D3DWE0 Nucleic acid-binding1.0e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQELQQTNAAA+PGLRKPVFVKIEQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+A+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

A0A6J1CG19 uncharacterized protein At4g28440-like9.4e-7089.61Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPAS E+QQ+NA A+PGLRKPVFVK+EQLKPGTNGHTL V+VV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIEL EP +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

A0A6J1FBC1 uncharacterized protein At4g28440-like6.3e-6687.01Show/hide
Query:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MAT KSPTPAS          + GLRKPVFVK+EQLKPGTNGHTLIV+VVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ EPE+FVVKEDNNLSL+EYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284401.9e-4366.67Show/hide
Query:  RKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAV
        RKPVFVK+EQLKPGT GHTL V+V+ +N V+   R      S+S+  + +RI ECL+GDETG ILFTARNDQVD +KPG T+ILRN++IDMFKG+MRL V
Subjt:  RKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAV

Query:  DKWGRIELAEPEDFVVKEDNNLSLVEYELVNV
        DKWGRIE      F VKEDNNLSLVEYEL+NV
Subjt:  DKWGRIELAEPEDFVVKEDNNLSLVEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein3.5e-4565.44Show/hide
Query:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L V+VV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A EP D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein3.5e-4565.44Show/hide
Query:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L V+VV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A EP D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein3.5e-4565.44Show/hide
Query:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L V+VV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A EP D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELA-EPEDFVVKEDNNLSLVEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein2.6e-4865.67Show/hide
Query:  AAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAV
        + K GL+KP F K++QL+PGT+GH + V++VS+  VLQKGR+     RQ RI+EC+VGDETG I+FTARNDQVD +K G+T+ LRNAKIDM+KGSMRLAV
Subjt:  AAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAV

Query:  DKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAE
        DKWGR+E+ EP  F VKED N+SL+EYELVNV E
Subjt:  DKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein6.2e-5066.03Show/hide
Query:  GKSPTPASQELQ----QTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPG
        G++P P S   +    Q         +KPVFVK++QLKPGT+GHTL V+VV  N+V QK G + S HLR  RI+ECLVGDET  ILFTARNDQV+ +KPG
Subjt:  GKSPTPASQELQ----QTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPG

Query:  TTIILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE
         T+ LRNAKIDMFKGSMRLAVDKWGRIE  EP D  VKEDNNLSLVEYELVNV EE
Subjt:  TTIILRNAKIDMFKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAGGGAAATCACCTACGCCGGCGTCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAAACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAA
ACCCGGCACCAATGGTCACACACTCATCGTCAGGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGT
GCCTTGTTGGCGATGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAAGTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGATATG
TTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTCGCTGAGCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGA
ACTTGTGAATGTTGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
GAAAAATGTCACAAAAAAAGGCCAAAGAGGAAGAAAGCACAAAGAATGAAGTGAAGAGATGCTATTGCTATATATATATAAACACCACTCTCCAGAAATCTCACAATTCA
CAGCGCCACACACACAAACCTAAATCCGTCAAGAAAGAAGAGAACTTTCGGTCGATTTACACGGATTCGGATTAGGGTGTTGACGTGATCTTCTTCAGCTTTCGCATCAA
TGGCGACAGGGAAATCACCTACGCCGGCGTCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAAACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAA
CCCGGCACCAATGGTCACACACTCATCGTCAGGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTG
CCTTGTTGGCGATGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAAGTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGATATGT
TCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTCGCTGAGCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAA
CTTGTGAATGTTGCAGAGGAATGAGAAGGTACCACTGAAGGCCAACTTTAAGTATACAATGGGTTGAGATGGCTGGTCAGTGAGTTTCCTGGTAATCTGCTGATGTGAAT
ATATAACAACGTTATATTATAATTTTGTGTGGGTGAAGTATTTAAGCGAACAATCCCTTGATTTCTTCTAAAGCTCTATTCCGTCGGTATGACTTACATGAAGCCATGTT
TTGTCGGGTAAAGGTCGGGTAAAGGTATAAATAGGTACTAGTTTGGTACTTCTTATAACTCTGGAAATGTAATGGAGCGTTAACGACGGCAAAGAATGCTTTTGGTATGC
CTTTGATATCATATCTAACATGCAAAGTTTTCAATTTGCTGGGTTTGTATATTGTATACTCTCTGGCAATTCATATTACATGCAGGCTGTGGACAATAACTTGTCCTAGA
AGGTGGCTTTACTTTGAAGGCAATAGCAAAAGTCTTTTCGACCAATGTAGAAGGTAAACTGTCTCAACTTTAACGAGCATTAGTCTGTGAATTGATCCCTTTATGTCGTA
CCATTAAACCTGTCCATTATCCTAATCTCTTGACGAAGAGCATATGCCATACCTAGTACTTTTTCTCTTTAAATGGTAATGCTATAATCTACAGGCCTTTTGAACTTGAA
TTCATTCTAAGAACAGGTAGCTATGAAATTAGAGTTTCATGTGTTGATGGTTG
Protein sequenceShow/hide protein sequence
MATGKSPTPASQELQQTNAAAKPGLRKPVFVKIEQLKPGTNGHTLIVRVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDM
FKGSMRLAVDKWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE