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PI0027069 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027069
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr12:13164807..13165031
RNA-Seq ExpressionPI0027069
SyntenyPI0027069
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043137.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.3e-1972.22Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETIA+++V++ DIANES + GEK++D KLVRKVLRSLP +F MKVT IEEAND+S MKLDEL GSLRT
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
MCH82645.1 gag-protease polyprotein [Trifolium medium]2.6e-1972.22Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M+EDETI  +H+ I DIAN S SLGEK+++EKLVRK+LRSLPKRF MKVT +EEANDIS M++DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
MCI34724.1 gag-pol polyprotein [Trifolium medium]3.3e-1969.44Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI+K++ ++RDIAN  F+LGEK+++EKLVRK LRSLPKRF MKVT IEEA D+S++K+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
PNX73473.1 gag-protease polyprotein, partial [Trifolium pratense]2.6e-1970.83Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI +++ ++RDIAN SFSL EK+++EKLVRK+LRSLPKRF MKVT IEEA D+S+MK+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
PNY16301.1 gag-protease polyprotein [Trifolium pratense]7.5e-1968.06Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI++++ ++RDIAN SF+LG K+++EKL RK+LRSLPKRF MKVT IEEA D+S+MK+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
TrEMBL top hitse value%identityAlignment
A0A2K3L4M7 Gag-protease polyprotein (Fragment)1.2e-1970.83Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI +++ ++RDIAN SFSL EK+++EKLVRK+LRSLPKRF MKVT IEEA D+S+MK+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
A0A2K3PLY8 Gag-protease polyprotein3.6e-1968.06Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI++++ ++RDIAN SF+LG K+++EKL RK+LRSLPKRF MKVT IEEA D+S+MK+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
A0A392M5N9 Gag-protease polyprotein1.2e-1972.22Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M+EDETI  +H+ I DIAN S SLGEK+++EKLVRK+LRSLPKRF MKVT +EEANDIS M++DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
A0A392RFB6 Gag-pol polyprotein1.6e-1969.44Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETI+K++ ++RDIAN  F+LGEK+++EKLVRK LRSLPKRF MKVT IEEA D+S++K+DELIGSL+T
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
A0A5A7TMW2 Gag-proteinase polyprotein1.6e-1972.22Show/hide
Query:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
        M EDETIA+++V++ DIANES + GEK++D KLVRKVLRSLP +F MKVT IEEAND+S MKLDEL GSLRT
Subjt:  MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAGACGAGACCATTGCTAAATACCATGTCAAGATTCGCGATATTGCAAATGAATCTTTTTCATTAGGAGAAAAATTAACTGATGAAAAGTTAGTTCGAAAAGT
CCTGAGATCTCTTCCCAAAAGATTCAAAATGAAAGTTACAGTTATTGAAGAGGCGAATGATATTTCATCAATGAAGCTGGATGAGCTGATTGGGTCTCTGCGAACTTTGA
GTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAGACGAGACCATTGCTAAATACCATGTCAAGATTCGCGATATTGCAAATGAATCTTTTTCATTAGGAGAAAAATTAACTGATGAAAAGTTAGTTCGAAAAGT
CCTGAGATCTCTTCCCAAAAGATTCAAAATGAAAGTTACAGTTATTGAAGAGGCGAATGATATTTCATCAATGAAGCTGGATGAGCTGATTGGGTCTCTGCGAACTTTGA
GTTAA
Protein sequenceShow/hide protein sequence
MQEDETIAKYHVKIRDIANESFSLGEKLTDEKLVRKVLRSLPKRFKMKVTVIEEANDISSMKLDELIGSLRTLS