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PI0027087 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027087
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:68145..68717
RNA-Seq ExpressionPI0027087
SyntenyPI0027087
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]5.2e-4162.58Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA   E EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP PLSPL+DHL+GLIE  SD SLTGPHA+DSAFEEVGTS+TPV +P E
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V  KD+E  +P SK    PK  L+KV S HA L   E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.2e-4264.42Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA   E EVKE +++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP PLSPL+DHL+GLIE  SD SLTGPHA+DSAFEEVGTS+TPV +P E
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V  KD+E  NP SK    PK  L+KV S HA LK  E PLD S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

KAA0060401.1 hypothetical protein E6C27_scaffold22G002130 [Cucumis melo var. makuwa]1.5e-4063.92Show/hide
Query:  EREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAEQPSHP
        E EVKE++++SDSS+SDRHWKRP KKAK  GD+  GRG +T+ + +VP  LSPLDDHL+GLIE+ SD SLTGPHA+DSAFEEVGTSKTPV + AEQ  HP
Subjt:  EREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAEQPSHP

Query:  LALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
         ALL+EI RGKM V  KD+E  +P SK    PK PL+KV STHA LK  E  L  S K
Subjt:  LALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]8.0e-4263.8Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA     EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP+ LSPL+DHL+GLIE  SD SL GPHA+DSAFEEVGTSKTPV +PAE
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V EKD+E  +PLSK    PK  L+KV S HA LK  E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]8.0e-4263.8Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA     EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP+ LSPL+DHL+GLIE  SD SL GPHA+DSAFEEVGTSKTPV +PAE
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V EKD+E  +PLSK    PK  L+KV S HA LK  E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein2.5e-4162.58Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA   E EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP PLSPL+DHL+GLIE  SD SLTGPHA+DSAFEEVGTS+TPV +P E
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V  KD+E  +P SK    PK  L+KV S HA L   E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

A0A5A7TX42 Uncharacterized protein5.9e-4364.42Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA   E EVKE +++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP PLSPL+DHL+GLIE  SD SLTGPHA+DSAFEEVGTS+TPV +P E
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V  KD+E  NP SK    PK  L+KV S HA LK  E PLD S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

A0A5A7V2J6 Uncharacterized protein3.8e-4263.8Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA     EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP+ LSPL+DHL+GLIE  SD SL GPHA+DSAFEEVGTSKTPV +PAE
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V EKD+E  +PLSK    PK  L+KV S HA LK  E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

A0A5D3BW91 Uncharacterized protein3.8e-4263.8Show/hide
Query:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE
        MA     EVKE++++SDSS+SDRHWKRP KKAK SGD   GRG + +E+P+VP+ LSPL+DHL+GLIE  SD SL GPHA+DSAFEEVGTSKTPV +PAE
Subjt:  MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAE

Query:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
        Q   P ALLEEI RGKM V EKD+E  +PLSK    PK  L+KV S HA LK  E PL  S K
Subjt:  QPSHPLALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

A0A5D3DEN0 Uncharacterized protein7.3e-4163.92Show/hide
Query:  EREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAEQPSHP
        E EVKE++++SDSS+SDRHWKRP KKAK  GD+  GRG +T+ + +VP  LSPLDDHL+GLIE+ SD SLTGPHA+DSAFEEVGTSKTPV + AEQ  HP
Subjt:  EREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAEQPSHP

Query:  LALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK
         ALL+EI RGKM V  KD+E  +P SK    PK PL+KV STHA LK  E  L  S K
Subjt:  LALLEEIHRGKMKVNEKDVEKSNPLSKG---PKVPLEKVKSTHASLKIFEPPLDTSRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTACCCACGAGAGAGAGGTCAAGGAATATAGAGAGCAGAGCGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACCTTCAAAGAAAGCAAAGGCATCAGGCGA
TGATTCATGTGGAAGAGGTTCAACTACTATGGAAATTCCTAATGTTCCAACACCATTATCACCTTTGGACGATCATCTTCAAGGACTTATAGAGATACGTAGTGATGCCT
CTCTGACAGGGCCCCATGCCATGGATTCGGCCTTTGAAGAAGTTGGTACTTCAAAGACACCAGTTGCCAGACCAGCTGAACAACCCTCACATCCTCTTGCTCTTCTCGAG
GAGATTCATCGGGGCAAGATGAAGGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTTGTCCAAAGGACCCAAAGTGCCTTTAGAGAAGGTCAAATCCACGCATGCGTC
TCTCAAGATTTTCGAGCCACCTTTAGACACTTCGAGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTACCCACGAGAGAGAGGTCAAGGAATATAGAGAGCAGAGCGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACCTTCAAAGAAAGCAAAGGCATCAGGCGA
TGATTCATGTGGAAGAGGTTCAACTACTATGGAAATTCCTAATGTTCCAACACCATTATCACCTTTGGACGATCATCTTCAAGGACTTATAGAGATACGTAGTGATGCCT
CTCTGACAGGGCCCCATGCCATGGATTCGGCCTTTGAAGAAGTTGGTACTTCAAAGACACCAGTTGCCAGACCAGCTGAACAACCCTCACATCCTCTTGCTCTTCTCGAG
GAGATTCATCGGGGCAAGATGAAGGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTTGTCCAAAGGACCCAAAGTGCCTTTAGAGAAGGTCAAATCCACGCATGCGTC
TCTCAAGATTTTCGAGCCACCTTTAGACACTTCGAGGAAGTAG
Protein sequenceShow/hide protein sequence
MALTHEREVKEYREQSDSSRSDRHWKRPSKKAKASGDDSCGRGSTTMEIPNVPTPLSPLDDHLQGLIEIRSDASLTGPHAMDSAFEEVGTSKTPVARPAEQPSHPLALLE
EIHRGKMKVNEKDVEKSNPLSKGPKVPLEKVKSTHASLKIFEPPLDTSRK