; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027090 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027090
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationchr11:7715052..7718817
RNA-Seq ExpressionPI0027090
SyntenyPI0027090
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]3.8e-7394.19Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]5.8e-7495.48Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SSSGQSRPDLPV PNR KFQSETERL+ DVGGLEASLLQMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
         TTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]1.9e-6990.97Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SGQSR  LP   NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]9.7e-6990.32Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SGQSR  LP   NR KFQSE ERLS DVGGLE SL QMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]1.4e-7293.55Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSSSG SRPDLPVAPNR KFQSETE L+ +VGGLEASLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 11.8e-7394.19Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 11.0e-5580.67Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M SS GQSRPDLPV PNR KFQS+TERLS DVGGLE SLLQMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH
        ATTIARFTKQTDQWLAATHALNTAVK  G  +  +  +  +  SI   +H
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 14.1e-6585.16Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        M+S SG SRP LPVA NR   QSETERLS++ GGLEASLLQMV DHQ+ASLKLR++SEKAKKDAIQKAVRVSDLLV AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A TI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 19.4e-7090.97Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SGQSR  LP   NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 12.3e-6889.68Show/hide
Query:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SGQSR   P A NR KFQSE ERLS DVGGLEASL QMV DHQYASLKLRENSEKAKKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 16.8e-4161.36Show/hide
Query:  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

O55102 Biogenesis of lysosome-related organelles complex 1 subunit 12.1e-1836.21Show/hide
Query:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 12.1e-1836.21Show/hide
Query:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 15.0e-2039.66Show/hide
Query:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T  A+F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 12.1e-1836.21Show/hide
Query:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein4.8e-4261.36Show/hide
Query:  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  ETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCAGCAAGTTTCAATCGGAGACGGAGAGATTGAGCACCGATGTAGGTGGATTGGAAGC
TTCATTGCTTCAGATGGTCGGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAATTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTTTCGGATC
TTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAA
ACCGACCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTAC
GGCCATCCATAACATTTACCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
GCGTGAAATGTGAATACAGAATATTTCGCGGCGCGAACATGAATTCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTAGCGCCTAATCGCAGCAAGTTTCAATCGGAG
ACGGAGAGATTGAGCACCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCGGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAATTCCGAGAAGGCGAA
GAAAGATGCTATACAGAAGGCGGTACGCGTTTCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTA
GGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAAACCGACCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGG
ATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGAAATGCTTGTAGTCTGTAGAGTCGAGAAAAAGATCAATCCTTATC
CTCTGCTTTAAGTTCCGCTGAATCTCTGCCCCCATACATGGTTTGATAAGTTTAAAGGGTGCAGCATGCCCAGATGAAAACTCGTAGTAGCTTAGAACACCACAGTCACC
TGGCGTCTGCTACCTCGCTAACTGTATAAAAATGATTTTTCGACTTTGTTTTTTATGTTCACTGATTTGTTTTTCATTAGCACAGTGGATGTTACCATTTTGCCCATTTA
TTGCTTATGTAAACTGTAGTCTTCTTTGTACAATTATTAGCAGCTGCCATGTAATAATAATTTCTACATTCTTTCAA
Protein sequenceShow/hide protein sequence
MNSSSGQSRPDLPVAPNRSKFQSETERLSTDVGGLEASLLQMVGDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD