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PI0027099 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027099
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr11:22698588..22698968
RNA-Seq ExpressionPI0027099
SyntenyPI0027099
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039128.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-3865.57Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + IIL+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N++VE E   K  +KEK DE ++PMI+FLL+QY DIF  P  LPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

KAA0055376.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.5e-3964.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N+KVE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

KAA0061073.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-3863.93Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N++VE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

TYJ99303.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.5e-3964.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N+KVE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

TYK28905.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-3864.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        K IIL+G+PSL + ECSL+T+ KTW E+DQ FLLE+ N++VE E   K  +KEK D+ ++PMI+FLL+QYA IF  P GLPPKR++DH+I+T+P QRPIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

TrEMBL top hitse value%identityAlignment
A0A5A7T8C0 Ty3/gypsy retrotransposon protein5.4e-3965.57Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + IIL+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N++VE E   K  +KEK DE ++PMI+FLL+QY DIF  P  LPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

A0A5A7UM77 Ty3/gypsy retrotransposon protein3.1e-3964.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N+KVE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

A0A5A7UYM1 Ty3/gypsy retrotransposon protein1.2e-3863.93Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N++VE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

A0A5D3BJ50 Ty3/gypsy retrotransposon protein3.1e-3964.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        + I+L+G+PSL R ECSL+T+ KTW EEDQ FLLE+ N+KVE +   K  +KE+ DE ++PMI+FLL+QY DIF  P GLPPKR++DH+ILT+P Q+PIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

A0A5D3DZZ7 Ty3/gypsy retrotransposon protein2.0e-3864.75Show/hide
Query:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN
        K IIL+G+PSL + ECSL+T+ KTW E+DQ FLLE+ N++VE E   K  +KEK D+ ++PMI+FLL+QYA IF  P GLPPKR++DH+I+T+P QRPIN
Subjt:  KPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPIN

Query:  VRPYKYGHLQKEEIEKLVEEML
        VRPYKYGH+QK EIEKLV EML
Subjt:  VRPYKYGHLQKEEIEKLVEEML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGTAATAAACCAATTATATTGAGAGGAGAACCATCTTTAACTAGGATGGAATGTTCACTCAAGACCATTACAAAGACGTGGGATGAAGAAGATCAAGCTTTCCT
CTTGGAATTTCAAAATGTAAAAGTCGAAGGGGAATCAGAAGGGAAGGTGAAACAAAAGGAAAAAAGAGACGAAGAAGAGTTACCAATGATTCAGTTTCTTCTACGACAGT
ATGCTGATATATTCAATGCCCCAACCGGACTACCACCTAAAAGGGAGGTGGACCATCAGATCTTAACCGTGCCAGGACAAAGGCCAATTAATGTGCGACCTTATAAATAC
GGGCACCTCCAAAAGGAAGAGATTGAGAAATTAGTGGAAGAGATGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGTAATAAACCAATTATATTGAGAGGAGAACCATCTTTAACTAGGATGGAATGTTCACTCAAGACCATTACAAAGACGTGGGATGAAGAAGATCAAGCTTTCCT
CTTGGAATTTCAAAATGTAAAAGTCGAAGGGGAATCAGAAGGGAAGGTGAAACAAAAGGAAAAAAGAGACGAAGAAGAGTTACCAATGATTCAGTTTCTTCTACGACAGT
ATGCTGATATATTCAATGCCCCAACCGGACTACCACCTAAAAGGGAGGTGGACCATCAGATCTTAACCGTGCCAGGACAAAGGCCAATTAATGTGCGACCTTATAAATAC
GGGCACCTCCAAAAGGAAGAGATTGAGAAATTAGTGGAAGAGATGCTCTAA
Protein sequenceShow/hide protein sequence
MACNKPIILRGEPSLTRMECSLKTITKTWDEEDQAFLLEFQNVKVEGESEGKVKQKEKRDEEELPMIQFLLRQYADIFNAPTGLPPKREVDHQILTVPGQRPINVRPYKY
GHLQKEEIEKLVEEML