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PI0027122 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027122
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCholine-phosphate cytidylyltransferase
Genome locationchr01:6326347..6326950
RNA-Seq ExpressionPI0027122
SyntenyPI0027122
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAX95804.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]7.1e-0440.91Show/hide
Query:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL
        TVS  W  + GW I  RR+L  EE  +W  L+  L+ V+ +T RD+  W + K+G FS KSL  ++
Subjt:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL

KAA0035255.1 choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa]9.0e-3161.79Show/hide
Query:  EITPPFGMVVGLVMKLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDTKARG------KCNLD
        EITPPFGM+VGL             + GWNISYRRNL+E EFEDWL LM+LLSTV PTTSRDKWTWN+DKNGNFS KSL TDLDT  +            
Subjt:  EITPPFGMVVGLVMKLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDTKARG------KCNLD

Query:  RLLPKKSNSYSGKLDKTLSIQTI
           PK+SNS+ GKLD TLS QTI
Subjt:  RLLPKKSNSYSGKLDKTLSIQTI

KAA0057629.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]6.6e-2663.37Show/hide
Query:  MEITPPFGMVVGLVM--------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDT
        M+ITPPFGM+VGLVM              KL+ VSNFWED +GW    RRNL+EEE ED L LMNL+S +NPT+SRDKW+WN+DKNGNFSFK  T DLDT
Subjt:  MEITPPFGMVVGLVM--------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDT

Query:  K
        K
Subjt:  K

KAE8649124.1 hypothetical protein Csa_014630 [Cucumis sativus]1.9e-0443.28Show/hide
Query:  ASFSESQLTLEMEITPPFGMVVGL-VMKLATVSNFWEDEHG--WNISYRRNLKEEEFEDWLTLMNLL
        ASF  +    E  I+  F  +  L   K +TV+NFW+++HG  W I+YRRN KE+EFE+W+ L+ L+
Subjt:  ASFSESQLTLEMEITPPFGMVVGL-VMKLATVSNFWEDEHG--WNISYRRNLKEEEFEDWLTLMNLL

KGN44355.1 hypothetical protein Csa_016666 [Cucumis sativus]7.1e-3676.85Show/hide
Query:  MFFTASFSESQLTLEMEITPPFGMVVGLVM-------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKN
        MFFTASFSESQLT EMEI PPF ++VGLV+              LATVSN WEDEHGWNISYRRNLKEEEFEDWLTL NLLSTVNPT  RDKWTWNVDKN
Subjt:  MFFTASFSESQLTLEMEITPPFGMVVGLVM-------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKN

Query:  GNFSFKSL
        GNFSF SL
Subjt:  GNFSFKSL

TrEMBL top hitse value%identityAlignment
A0A0A0K3T0 Uncharacterized protein3.4e-3676.85Show/hide
Query:  MFFTASFSESQLTLEMEITPPFGMVVGLVM-------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKN
        MFFTASFSESQLT EMEI PPF ++VGLV+              LATVSN WEDEHGWNISYRRNLKEEEFEDWLTL NLLSTVNPT  RDKWTWNVDKN
Subjt:  MFFTASFSESQLTLEMEITPPFGMVVGLVM-------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKN

Query:  GNFSFKSL
        GNFSF SL
Subjt:  GNFSFKSL

A0A5A7T1C2 Choline-phosphate cytidylyltransferase4.3e-3161.79Show/hide
Query:  EITPPFGMVVGLVMKLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDTKARG------KCNLD
        EITPPFGM+VGL             + GWNISYRRNL+E EFEDWL LM+LLSTV PTTSRDKWTWN+DKNGNFS KSL TDLDT  +            
Subjt:  EITPPFGMVVGLVMKLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDTKARG------KCNLD

Query:  RLLPKKSNSYSGKLDKTLSIQTI
           PK+SNS+ GKLD TLS QTI
Subjt:  RLLPKKSNSYSGKLDKTLSIQTI

A0A5A7UVQ5 Retrotransposon protein, putative, unclassified3.2e-2663.37Show/hide
Query:  MEITPPFGMVVGLVM--------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDT
        M+ITPPFGM+VGLVM              KL+ VSNFWED +GW    RRNL+EEE ED L LMNL+S +NPT+SRDKW+WN+DKNGNFSFK  T DLDT
Subjt:  MEITPPFGMVVGLVM--------------KLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDT

Query:  K
        K
Subjt:  K

Q2R9U7 Retrotransposon protein, putative, unclassified3.5e-0440.91Show/hide
Query:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL
        TVS  W  + GW I  RR+L  EE  +W  L+  L+ V+ +T RD+  W + K+G FS KSL  ++
Subjt:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL

Q53PH7 Retrotransposon protein, putative, unclassified3.5e-0440.91Show/hide
Query:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL
        TVS  W  + GW I  RR+L  EE  +W  L+  L+ V+ +T RD+  W + K+G FS KSL  ++
Subjt:  TVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCACGGCTTCATTCTCTGAGTCGCAATTAACGTTGGAAATGGAAATAACACCTCCTTTTGGAATGGTTGTTGGATTGGTAATGAAATTGGCTACTGTGAGCAA
CTTTTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAAGAATTTGAAGATTGGTTGACTTTGATGAATCTTCTATCCACTGTCAATCCTA
CTACTTCTAGAGATAAATGGACTTGGAACGTTGACAAGAATGGGAACTTCTCCTTCAAATCATTGACAACGGATTTGGACACAAAAGCTCGAGGAAAATGCAATTTAGAC
AGACTTTTACCCAAGAAGTCAAATTCTTATAGTGGGAAATTGGACAAGACGCTATCAATACAAACGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCACGGCTTCATTCTCTGAGTCGCAATTAACGTTGGAAATGGAAATAACACCTCCTTTTGGAATGGTTGTTGGATTGGTAATGAAATTGGCTACTGTGAGCAA
CTTTTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAAGAATTTGAAGATTGGTTGACTTTGATGAATCTTCTATCCACTGTCAATCCTA
CTACTTCTAGAGATAAATGGACTTGGAACGTTGACAAGAATGGGAACTTCTCCTTCAAATCATTGACAACGGATTTGGACACAAAAGCTCGAGGAAAATGCAATTTAGAC
AGACTTTTACCCAAGAAGTCAAATTCTTATAGTGGGAAATTGGACAAGACGCTATCAATACAAACGATATAA
Protein sequenceShow/hide protein sequence
MFFTASFSESQLTLEMEITPPFGMVVGLVMKLATVSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLLSTVNPTTSRDKWTWNVDKNGNFSFKSLTTDLDTKARGKCNLD
RLLPKKSNSYSGKLDKTLSIQTI