| GenBank top hits | e value | %identity | Alignment |
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| KAA0026079.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 7.8e-81 | 61.89 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYFSEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+HFSLKYLQ+QK+I++M ARW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F IW K +H+ AG+FHI+DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+ +YY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| KAA0054966.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] | 3.4e-76 | 79.23 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
GAF+WGPKQQ+SFNLLK L NI VLKLPDF QAF VAVD CG G+GAVLSQQ HPIEYFSE+LSKSRQ WSTYEQELYALVRALKQWEHYLLSREF+LL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEK
T+HFSLKYL SQK+IS M ARW+SY QRFDFVI+HQ KENKVADALSRK +LL L EI +FNH+ ELY+KD DFE+IWEK
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEK
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| KAE8652794.1 hypothetical protein Csa_022828 [Cucumis sativus] | 1.2e-84 | 62.7 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G+F+WG +++SF LK L++ PVLKLP+F + F V VDA G+G+G VLSQ+GHP+EYFSEKLS RQ WSTYEQELYALVRALKQWEHYLL+ F+LL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+HFSLK+L SQKTISRM ARW+ ++QRFDFVI+H + K NKVADALSRKG LL TL +II F+HL LY D DF +IWE C NH D+HI++ FL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK D+LC+P TSLRE +IKE HS GLAG F + KT + +++
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| KAG7588770.1 Integrase catalytic core [Arabidopsis suecica] | 5.8e-76 | 56.97 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F WGP+Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ PI +FSEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+H +LK+L SQK I++M ARW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +W+KC + DFHI +G+L
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK D LCIP +SLRE+LI+E H GGL+G + KT L +RYY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| TYJ96334.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 7.8e-81 | 61.89 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYFSEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+HFSLKYLQ+QK+I++M ARW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F IW K +H+ AG+FHI+DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+ +YY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SLE0 Transposon Ty3-I Gag-Pol polyprotein | 3.8e-81 | 61.89 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYFSEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+HFSLKYLQ+QK+I++M ARW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F IW K +H+ AG+FHI+DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+ +YY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| A0A5D3BBL1 Transposon Ty3-I Gag-Pol polyprotein | 3.8e-81 | 61.89 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F+W ++ +LSN P + +Q F VAV+A GAVLSQ HPIEYFSEKLS+ RQ+WSTY+QE+YAL+RALKQWEHYLLS+EFLLL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+HFSLKYLQ+QK+I++M ARW+S+++RFDF+I+H++ KENKVA+ALSRK SLL+TL ++I F HLP LYE D +F IW K +H+ AG+FHI+DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK + LCIP TSLRE L+KEAHSGGLAG F Q KT EIL+ +YY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| A0A5D3DGR0 Reverse transcriptase | 1.6e-76 | 79.23 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
GAF+WGPKQQ+SFNLLK L NI VLKLPDF QAF VAVD CG G+GAVLSQQ HPIEYFSE+LSKSRQ WSTYEQELYALVRALKQWEHYLLSREF+LL
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEK
T+HFSLKYL SQK+IS M ARW+SY QRFDFVI+HQ KENKVADALSRK +LL L EI +FNH+ ELY+KD DFE+IWEK
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEK
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| A0A6D2HLB5 Reverse transcriptase | 1.1e-75 | 56.56 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F WG +Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ P+ +FSEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+H +LK+L SQK I++M ARW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +W+KC + DFHI DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK D LCIP +SLRE+LI++ H GGL+G + KT L +RYY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| A0A6D2HS27 Uncharacterized protein | 1.1e-75 | 56.56 | Show/hide |
Query: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
G F WG +Q SF L+K KL PVL LPDF + F V DA G+G+GAVLSQ+ P+ +FSEKLS++RQ WSTY+QE YA+ RAL+QWEHYL+ REF+L
Subjt: GAFKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLL
Query: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
T+H +LK+L SQK I++M ARW+S++Q+F F+I+H++ NKVADALSR+ SLL TL EI+ F L ELYE D +F+ +W+KC + DFHI DGFL
Subjt: TEHFSLKYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSRKGSLLATLYIEIIVFNHLPELYEKDGDFENIWEKCINHVYAGDFHILDGFL
Query: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
FK D LCIP +SLRE+LI++ H GGL+G + KT L +RYY
Subjt: FKNDLLCIPQTSLREELIKEAHSGGLAGPFCQQKTYEILTKRYY
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.4e-24 | 42.66 | Show/hide |
Query: PKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSL
P+ ++F LK +S P+LK+PDF++ F + DA + +GAVLSQ GHP+ Y S L++ +ST E+EL A+V A K + HYLL R F + ++H L
Subjt: PKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSL
Query: KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
+L K + RW + FDF I++ KEN VADALSR
Subjt: KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
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| P0CT34 Transposon Tf2-1 polyprotein | 5.2e-19 | 35.9 | Show/hide |
Query: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+ Y+S K+SK++ +S ++E+ A++++LK W HYL S
Subjt: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
Query: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
F +LT+H +L + + ++ ARW ++Q F+F I ++ N +ADALSR
Subjt: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
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| P0CT41 Transposon Tf2-12 polyprotein | 5.2e-19 | 35.9 | Show/hide |
Query: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+ Y+S K+SK++ +S ++E+ A++++LK W HYL S
Subjt: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
Query: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
F +LT+H +L + + ++ ARW ++Q F+F I ++ N +ADALSR
Subjt: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.2e-22 | 41.3 | Show/hide |
Query: SFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQS
+F LK + P+L+LPDF + F + DA + +GAVLSQ GHPI + S L+ +S E+EL A+V A K + HYLL R+FL+ ++H L++L +
Subjt: SFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQGHPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLSREFLLLTEHFSLKYLQS
Query: QKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
K RW + + F I + KEN VADALSR
Subjt: QKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 5.2e-19 | 35.9 | Show/hide |
Query: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
+KW P Q + +K L + PVL+ DFS+ + DA + VGAVLSQ+ +P+ Y+S K+SK++ +S ++E+ A++++LK W HYL S
Subjt: FKWGPKQQNSFNLLKTKLSNIPVLKLPDFSQAFGVAVDACGMGVGAVLSQQG-----HPIEYFSEKLSKSRQLWSTYEQELYALVRALKQWEHYLLS--R
Query: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
F +LT+H +L + + ++ ARW ++Q F+F I ++ N +ADALSR
Subjt: EFLLLTEHFSL--KYLQSQKTISRMRARWMSYIQRFDFVIRHQTNKENKVADALSR
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