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PI0027146 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027146
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr02:16460270..16462476
RNA-Seq ExpressionPI0027146
SyntenyPI0027146
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005525 - GTP binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050086.1 reverse transcriptase [Cucumis melo var. makuwa]8.2e-0959.7Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        + MTD+IDSHID KMSES++SET IP NI EQ +V T VI + +GS+   EV ARV ++  REDRSE
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

KAA0060782.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-0757.97Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSEKN
        QGMTD+IDSHID KMSESDRSETAIP NIGEQ +V+T VI D +GS+   E     T+ +     S +N
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSEKN

KAA0065411.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.5e-1370.15Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        QGMTDTIDSHID K SESDRSET  P NI    SV+TG + DREGSDGG +VI +VTE+N REDR E
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

KAA0067418.1 tRNA modification GTPase MnmE [Cucumis melo var. makuwa]3.4e-1571.64Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        QG+TDTIDSHID KMSESD+ ET IP NIGE  +V+TGV+S+REGSDGG EVIA+VTE+N RE+  E
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

TYK06339.1 reverse transcriptase [Cucumis melo var. makuwa]4.8e-0959.7Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        + MTD+IDSHID KM+ESD+SET IP NI EQ +V T VI D +GS+   +V ARV ++  REDRSE
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

TrEMBL top hitse value%identityAlignment
A0A5A7U7D6 Reverse transcriptase3.9e-0959.7Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        + MTD+IDSHID KMSES++SET IP NI EQ +V T VI + +GS+   EV ARV ++  REDRSE
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

A0A5A7UY25 Reverse transcriptase7.4e-0857.97Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSEKN
        QGMTD+IDSHID KMSESDRSETAIP NIGEQ +V+T VI D +GS+   E     T+ +     S +N
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSEKN

A0A5A7VI50 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-1370.15Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        QGMTDTIDSHID K SESDRSET  P NI    SV+TG + DREGSDGG +VI +VTE+N REDR E
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

A0A5A7VI58 tRNA modification GTPase MnmE1.7e-1571.64Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        QG+TDTIDSHID KMSESD+ ET IP NIGE  +V+TGV+S+REGSDGG EVIA+VTE+N RE+  E
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

A0A5D3C7K7 Reverse transcriptase2.3e-0959.7Show/hide
Query:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE
        + MTD+IDSHID KM+ESD+SET IP NI EQ +V T VI D +GS+   +V ARV ++  REDRSE
Subjt:  QGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTCGCCTATACACATTACAGAAATAGGTTCATGAGTGAAAGTGACTCGGTCAGAGACCGATTCCCTCCCTTATGGAGGTTTGTTTTGAAGTTCGACTTGAGGAG
GATCGTACAAAATACAGGACGGGTATATGTGAGTGAGTCTACTAGAACTTCTCAACCACCTGATTTACTTGACAACCCGATCACTCCCAGTCCTACCACTCTAGGTGCCA
TTGCTCAATTAGCCCCGATCCTTACAACACAGTCCTACCTACGAACCAAGTTCCTTGGAAGACCTACTATAGGAGGAATCTTAGAAAGGATGTTGAGTTCCCTACAACTC
AACCAGCTCCAGTCTAAGATTCTAAACCTCTGCTATCAAGGTATGACGGATACTATTGACTCACATATTGACATCAAAATGAGTGAAAGTGACAGGTCCGAGACAGCTAT
CCCTAGGAACATTGGTGAACAGAACAGTGTTGAAACTGGGGTCATTTCAGACAGAGAAGGCAGTGATGGTGGGGCTGAAGTCATTGCAAGAGTTACTGAGGATAACACTA
GGGAGGATCGTTCAGAAAAAAATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTCGCCTATACACATTACAGAAATAGGTTCATGAGTGAAAGTGACTCGGTCAGAGACCGATTCCCTCCCTTATGGAGGTTTGTTTTGAAGTTCGACTTGAGGAG
GATCGTACAAAATACAGGACGGGTATATGTGAGTGAGTCTACTAGAACTTCTCAACCACCTGATTTACTTGACAACCCGATCACTCCCAGTCCTACCACTCTAGGTGCCA
TTGCTCAATTAGCCCCGATCCTTACAACACAGTCCTACCTACGAACCAAGTTCCTTGGAAGACCTACTATAGGAGGAATCTTAGAAAGGATGTTGAGTTCCCTACAACTC
AACCAGCTCCAGTCTAAGATTCTAAACCTCTGCTATCAAGGTATGACGGATACTATTGACTCACATATTGACATCAAAATGAGTGAAAGTGACAGGTCCGAGACAGCTAT
CCCTAGGAACATTGGTGAACAGAACAGTGTTGAAACTGGGGTCATTTCAGACAGAGAAGGCAGTGATGGTGGGGCTGAAGTCATTGCAAGAGTTACTGAGGATAACACTA
GGGAGGATCGTTCAGAAAAAAATCAATAA
Protein sequenceShow/hide protein sequence
MPLAYTHYRNRFMSESDSVRDRFPPLWRFVLKFDLRRIVQNTGRVYVSESTRTSQPPDLLDNPITPSPTTLGAIAQLAPILTTQSYLRTKFLGRPTIGGILERMLSSLQL
NQLQSKILNLCYQGMTDTIDSHIDIKMSESDRSETAIPRNIGEQNSVETGVISDREGSDGGAEVIARVTEDNTREDRSEKNQ