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PI0027150 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027150
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsuccinate dehydrogenase subunit 6, mitochondrial
Genome locationchr02:6615810..6619994
RNA-Seq ExpressionPI0027150
SyntenyPI0027150
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034574 - Succinate dehydrogenase subunit 6, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450314.1 PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo]4.5e-7695.21Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPT LP WSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVST GVAWKYS+SLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
        SFLAGG FGWTFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEGS
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
XP_011660175.1 succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus]2.9e-7594.52Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSPYVQR T LP WSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
        SFLAGGVFGWTFG EIANHWYQLYR+DTM AQVKFMEWWRNKSEGS
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
XP_022153276.1 succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia]2.5e-7491.84Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR   LP WSSSDVE FIASDPVHGP LKTAREAVNFGLTGSVIGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
        SFLAGGVFGWTFGHE+ANHWYQLYRLDTM AQVKFMEWWRNK+EG F
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
XP_022927277.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata]6.5e-7592.52Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR   LP WS SDVEEFIASDPVHGPVLKTAREAVNFGLTGS+IGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
        SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSEG F
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
XP_038880701.1 succinate dehydrogenase subunit 6, mitochondrial [Benincasa hispida]1.3e-7592.52Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSI+DNYSPY+QR T LP WSSSDVEEFIASDPVHGP LKTAREAVNFGLTGSV+GAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
        SFLAG  FGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG F
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
TrEMBL top hitse value%identityAlignment
A0A1S3BP04 succinate dehydrogenase subunit 6, mitochondrial2.2e-7695.21Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPT LP WSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVST GVAWKYS+SLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
        SFLAGG FGWTFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEGS
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
A0A5D3DY28 Succinate dehydrogenase subunit 62.2e-7695.21Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPT LP WSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVST GVAWKYS+SLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
        SFLAGG FGWTFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEGS
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
A0A6J1DK58 succinate dehydrogenase subunit 6, mitochondrial1.2e-7491.84Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+PYVQR   LP WSSSDVE FIASDPVHGP LKTAREAVNFGLTGSVIGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
        SFLAGGVFGWTFGHE+ANHWYQLYRLDTM AQVKFMEWWRNK+EG F
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
A0A6J1EGQ0 succinate dehydrogenase subunit 6, mitochondrial-like3.2e-7592.52Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR   LP WS SDVEEFIASDPVHGPVLKTAREAVNFGLTGS+IGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
        SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSEG F
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF
A0A6J1HQ77 succinate dehydrogenase subunit 6, mitochondrial-like6.0e-7493.06Show/hide
Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSP+VQR   LP WS SDVEEFIASDPVHGPVLKTAREAVNFGLTGS+IGAVST GVAWKYSRSLHGAGL
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGL

Query:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSE
Subjt:  SFLAGGVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
SwissProt top hitse value%identityAlignment
Q6ZCC4 Succinate dehydrogenase subunit 6, mitochondrial1.1e-2944.44Show/hide
Query:  KHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAGGVFGWT
        +H EG K  W++ FS LD +     R   LP W+ +DV+EFIASDPV+GP LK  RE+  F L G+++G     G+A KYS++ HG  L+   G + G  
Subjt:  KHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAGGVFGWT

Query:  FGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
         G E+A HWYQLY+ D  GA ++F+ WW +K  G+
Subjt:  FGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGS
Q941A6 Succinate dehydrogenase subunit 6, mitochondrial3.9e-5469.78Show/hide
Query:  SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAG
        S+SF  K+W G K+FWS+R S  +NY+ + +R   LP WSSSDVEEFIASDPVHGP LKTAREAV FG+TG+ +GAVST   AWKYSRS HGA LSFL G
Subjt:  SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAG

Query:  GVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        GVFGWTFG E+ANH  QLY+LDTM AQVKFMEWW  KS+
Subjt:  GVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
Arabidopsis top hitse value%identityAlignment
AT1G08480.1 unknown protein2.8e-5569.78Show/hide
Query:  SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAG
        S+SF  K+W G K+FWS+R S  +NY+ + +R   LP WSSSDVEEFIASDPVHGP LKTAREAV FG+TG+ +GAVST   AWKYSRS HGA LSFL G
Subjt:  SQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAG

Query:  GVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        GVFGWTFG E+ANH  QLY+LDTM AQVKFMEWW  KS+
Subjt:  GVFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAATTTTGGTCCGAGAGATTCTCCATTCTCGACAACTATAGCCCCTACGTCCAGCG
CCCGACCTCTCTTCCTTTATGGTCTTCCTCCGATGTGGAGGAATTTATTGCTTCTGACCCCGTTCATGGCCCCGTTTTGAAGACTGCCAGAGAGGCTGTAAACTTTGGTC
TCACAGGAAGTGTTATCGGAGCTGTATCAACTGTAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTGCTGGGCTGTCGTTCCTTGCGGGAGGTGTATTTGGTTGG
ACTTTTGGCCATGAGATCGCAAATCATTGGTATCAACTCTACAGGCTGGACACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGTCCGAGGGAAGTTT
TTAA
mRNA sequenceShow/hide mRNA sequence
CAACCTTCACTTTCCTCACAAACTCAAAACAAAACGAGCTTTGAAGAGCGAGATTGGAGAGCTAGAAGAGAAGAACAGCCTTCAGGATTCTGATTTCAATCGGATTTAGC
TTCTCAAATCTCAATCCTAATCTGTTTCAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAATTTTGGTCCGAGAG
ATTCTCCATTCTCGACAACTATAGCCCCTACGTCCAGCGCCCGACCTCTCTTCCTTTATGGTCTTCCTCCGATGTGGAGGAATTTATTGCTTCTGACCCCGTTCATGGCC
CCGTTTTGAAGACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATCGGAGCTGTATCAACTGTAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGT
GCTGGGCTGTCGTTCCTTGCGGGAGGTGTATTTGGTTGGACTTTTGGCCATGAGATCGCAAATCATTGGTATCAACTCTACAGGCTGGACACCATGGGTGCACAAGTTAA
GTTTATGGAGTGGTGGAGAAACAAGTCCGAGGGAAGTTTTTAAAACTCTGATTTGCAGTTGAAGCAGCAGAGCACACACACTGCAGCTGCCATCTAAAATAAAAATGTAA
GTGCAACTTTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTGTCTCCTTTGTTATCTTCTGGAAATG
ACTCATTCATTTGCGAGCTTGTTAGTGAATGTACCTATCTTTACCAAATAACTCCAATCTTGGGTGTTAGTTAGGGTCTAAAGCATGTCCAAAATGGATACACTTAGTTT
TGTTGAAAGAATATTAGCTAAATTATATATAAAATAAATAACCTTGAACTGTGCTTTGGTTAAAAAAAACTGCGAAGTTGCAATAATATGCTTGACTTTTTAAAAGTGTT
TTAAAACTATCCTTAGAGTAGAAGTTTGATGGATGGAAAGAAACTGAAATTTGGAATGGTGGGGCAGTGATCTAGGACGATGAGACTGATGACTATTTCAGATCATTTTG
ACACAGTATCATGTTTCAATTTTTGCTAAATATTCCAATGGCTGTCCATCCCAAGGTAGGATAAGTTTTGAAATGTTTATGTAGAAGTCAAATGTATTGTTGTAATTTTG
AAAGAATAGGGTTATTTTTTAAAAAAAAAATGTCAGGAGGTGTTTTTATAATTTACCAAATTCCACATCCCCTTTCTCCACATGTATATTTTTTTTTGTAATGTCTTTTC
TCTAAAACTGGTTATAATTATATAATAGATTTGAAACTTGTTAGGGAAGTATTGTTATTTTGCATATGCATACTTTGGGACTATTTGGGGGAAGGGTTGAGTTATGGGAG
ATTAGTGTTATTATAATCCTAATGTTATAATATTCCTAGTGTTATAATAGTATGTGTTTGGGAGAAGGATTATGGTAGGTAGTGTTATAATAGTATGTGTTTGGGGGAAG
GATTATGGAGGTAGTGTTATAATAGTATGTGTTTGGGGGAAGGATTATGTAAGTAGTGT
Protein sequenceShow/hide protein sequence
MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTSLPLWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTVGVAWKYSRSLHGAGLSFLAGGVFGW
TFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGSF