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PI0027156 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027156
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLEA_2 domain-containing protein
Genome locationchr02:3521419..3522191
RNA-Seq ExpressionPI0027156
SyntenyPI0027156
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653483.1 hypothetical protein Csa_007184 [Cucumis sativus]8.8e-3386.52Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        PSKNVSV R  VRG+GVNLSS AKNE+I+ VKQRAV+LKVEIGVPIKVKIG+VKSWK+KVKVNCDVTVD+LTAAAKIVKKNCDYSVKIW
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

XP_004144152.2 LOW QUALITY PROTEIN: NDR1/HIN1-like protein 13 [Cucumis sativus]3.9e-3344.96Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP
        MADRVHPTADSPRPSTSST+SDTTKP SPPP       PK +                                                   F   + P
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP

Query:  KT---------------LTASNSTLAKTTATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDSV
        K+               LT+S  +     +  A  P                                 PSKNVSV R  VRG+GVNLSS AKNE+I+ V
Subjt:  KT---------------LTASNSTLAKTTATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDSV

Query:  KQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        KQRAV+LKVEIGVPIKVKIG+VKSWK+KVKVNCDVTVD+LTAAAKIVKKNCDYSVKIW
Subjt:  KQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

XP_008451090.1 PREDICTED: protein YLS9-like [Cucumis melo]3.6e-3443.68Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP
        MADRVHPT DSPRPSTSST+SDTTKPPSPPP       PK +                                                   F   + P
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP

Query:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI
        K+       ++ S   L  +++++A +P                                            P+KNVSV R  VRG+GVNLSS AKN LI
Subjt:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI

Query:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        +SVKQR VVLKVEIGVPIKVK+GAVKSWKM+VKVNCDVTVD+LT AAKIVKKNCDYSVKIW
Subjt:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

XP_023531236.1 NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]1.4e-2570.79Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P+KN++VFR  VRGSGVNLS++A N +IDS  + AV  KVEI  PIK+KIG+VKSWK++VKV CDVTVDQL+AAAKIV KNCDYSVK+W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

XP_038879841.1 NDR1/HIN1-like protein 13 [Benincasa hispida]4.7e-2643.02Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK--------------------------------------------------FTAFLLPK
        MADRVHP ADSPRPSTSSTVSD +KPPSPPP       PK +                                                  F   + PK
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK--------------------------------------------------FTAFLLPK

Query:  T--------------LTASNSTLAKTT---ATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDS
        +              LTAS+S++          A  P                                 PSKNV+VFR  VRGSGVNLSS AKN LIDS
Subjt:  T--------------LTASNSTLAKTT---ATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDS

Query:  VKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKI
         K+RAV LKVEI  PIK+KIG+VK+W+MKVKV CDVTVDQLTAAAKIV KNCDYSVK+
Subjt:  VKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKI

TrEMBL top hitse value%identityAlignment
A0A0A0LX01 LEA_2 domain-containing protein2.5e-3344.96Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP
        MADRVHPTADSPRPSTSST+SDTTKP SPPP       PK +                                                   F   + P
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP

Query:  KT---------------LTASNSTLAKTTATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDSV
        K+               LT+S  +     +  A  P                                 PSKNVSV R  VRG+GVNLSS AKNE+I+ V
Subjt:  KT---------------LTASNSTLAKTTATTAAAP---------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELIDSV

Query:  KQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        KQRAV+LKVEIGVPIKVKIG+VKSWK+KVKVNCDVTVD+LTAAAKIVKKNCDYSVKIW
Subjt:  KQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

A0A1S3BRG5 protein YLS9-like1.7e-3443.68Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP
        MADRVHPT DSPRPSTSST+SDTTKPPSPPP       PK +                                                   F   + P
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP

Query:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI
        K+       ++ S   L  +++++A +P                                            P+KNVSV R  VRG+GVNLSS AKN LI
Subjt:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI

Query:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        +SVKQR VVLKVEIGVPIKVK+GAVKSWKM+VKVNCDVTVD+LT AAKIVKKNCDYSVKIW
Subjt:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

A0A5A7UIE7 Protein YLS9-like1.7e-3443.68Show/hide
Query:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP
        MADRVHPT DSPRPSTSST+SDTTKPPSPPP       PK +                                                   F   + P
Subjt:  MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTK---------------------------------------------------FTAFLLP

Query:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI
        K+       ++ S   L  +++++A +P                                            P+KNVSV R  VRG+GVNLSS AKN LI
Subjt:  KT-------LTASNSTLAKTTATTAAAP--------------------------------------------PSKNVSVFRIFVRGSGVNLSSRAKNELI

Query:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        +SVKQR VVLKVEIGVPIKVK+GAVKSWKM+VKVNCDVTVD+LT AAKIVKKNCDYSVKIW
Subjt:  DSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

A0A6J1F2Z0 NDR1/HIN1-like protein 138.6e-2670.79Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P KN++VFR  VRGSGVNLS++A N +IDS  + AV  KVEI  PIK+KIG+VKSWK++VKV CDVTVDQL+AAAKIV KNCDYSVK+W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

A0A6J1HX04 NDR1/HIN1-like protein 136.6e-2670.79Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P+KNV+VFR  VRGSGVNLS++A N +IDS  + AV  KVEI  PIK+KIG+VKSWK++VKV CDVTVDQL+AAAKI+ KNCDYSVK+W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

SwissProt top hitse value%identityAlignment
Q9ZVD2 NDR1/HIN1-like protein 135.9e-1642.7Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P+KNV+V ++ + GS + L+S  + E+ + V ++ V  K++I  P+K+K G+VK+W M V V+CDVTVD+LTA ++IV + C + V +W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

Arabidopsis top hitse value%identityAlignment
AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.2e-1742.7Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P+KNV+V ++ + GS + L+S  + E+ + V ++ V  K++I  P+K+K G+VK+W M V V+CDVTVD+LTA ++IV + C + V +W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

AT2G27080.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.2e-1742.7Show/hide
Query:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW
        P+KNV+V ++ + GS + L+S  + E+ + V ++ V  K++I  P+K+K G+VK+W M V V+CDVTVD+LTA ++IV + C + V +W
Subjt:  PSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW

AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.0e-1235.92Show/hide
Query:  NSTLAKTTATTAAAPPSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYS
        N T       TA   P+ NV+V    ++GS V L S ++ EL +S K+  V   + I  P+K K+G+V +W M + V+C +TVD+LTA+A +  +NC+  
Subjt:  NSTLAKTTATTAAAPPSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKVEIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYS

Query:  VKI
        + +
Subjt:  VKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACCGCGTCCATCCCACCGCCGATTCACCCCGTCCGAGCACCTCTTCCACCGTCTCCGACACCACTAAACCTCCCTCTCCACCTCCGGCACCTACGTCATCCAG
CTCCCCAAAGACCAAATTTACCGCGTTCCTCCTCCCGAAAACGCTCACCGCTTCAAACTCTACACTCGCCAAAACCACCGCCACAACCGCTGCCGCTCCTCCTTCGAAGA
ATGTCAGTGTGTTTAGAATTTTTGTGAGAGGATCTGGTGTTAATTTGTCAAGTAGGGCGAAGAATGAGTTGATTGATTCAGTGAAACAGAGGGCGGTGGTGTTGAAGGTG
GAGATTGGAGTTCCGATTAAGGTGAAAATTGGAGCGGTGAAGAGTTGGAAGATGAAAGTGAAGGTGAATTGTGACGTGACGGTGGATCAATTGACGGCGGCGGCGAAGAT
TGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACCGCGTCCATCCCACCGCCGATTCACCCCGTCCGAGCACCTCTTCCACCGTCTCCGACACCACTAAACCTCCCTCTCCACCTCCGGCACCTACGTCATCCAG
CTCCCCAAAGACCAAATTTACCGCGTTCCTCCTCCCGAAAACGCTCACCGCTTCAAACTCTACACTCGCCAAAACCACCGCCACAACCGCTGCCGCTCCTCCTTCGAAGA
ATGTCAGTGTGTTTAGAATTTTTGTGAGAGGATCTGGTGTTAATTTGTCAAGTAGGGCGAAGAATGAGTTGATTGATTCAGTGAAACAGAGGGCGGTGGTGTTGAAGGTG
GAGATTGGAGTTCCGATTAAGGTGAAAATTGGAGCGGTGAAGAGTTGGAAGATGAAAGTGAAGGTGAATTGTGACGTGACGGTGGATCAATTGACGGCGGCGGCGAAGAT
TGTTAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG
Protein sequenceShow/hide protein sequence
MADRVHPTADSPRPSTSSTVSDTTKPPSPPPAPTSSSSPKTKFTAFLLPKTLTASNSTLAKTTATTAAAPPSKNVSVFRIFVRGSGVNLSSRAKNELIDSVKQRAVVLKV
EIGVPIKVKIGAVKSWKMKVKVNCDVTVDQLTAAAKIVKKNCDYSVKIW