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PI0027187 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027187
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:18903910..18904110
RNA-Seq ExpressionPI0027187
SyntenyPI0027187
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025512.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]4.3e-1874.24Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +VDEESPKELV E +QYVL+ YQDVM ESL +TLPP RGIDHEI LLPGARP  KN YH  P ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

KAA0037019.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.3e-1471.21Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +V EESPKELV EV+QYVL+ YQDVM E    TLPP RGIDHEI LLP ARP  KNVYHM P E A
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

KAA0066834.1 reverse transcriptase [Cucumis melo var. makuwa]5.6e-1875.76Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +VDEESPKELV E +QYVL+ YQDVM ESL +TLPP RGIDHEI LLPGARP TKNVYH    ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

XP_023520264.1 uncharacterized protein LOC111783569 [Cucurbita pepo subsp. pepo]3.8e-1462.12Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +++E + +E VLE I+ V+N+Y D+MPESL +TLPPRRGIDHEI LLPG +P  KN Y MAP ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]6.4e-1462.12Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +++E + +E V E I+ VL+NY D+MPESL +TLPPRRGIDHEI LLPG +P  KN Y MAP ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

TrEMBL top hitse value%identityAlignment
A0A5A7SK59 RNA-directed DNA polymerase-like protein2.1e-1874.24Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +VDEESPKELV E +QYVL+ YQDVM ESL +TLPP RGIDHEI LLPGARP  KN YH  P ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

A0A5D3C405 RNA-directed DNA polymerase-like protein6.3e-1571.21Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +V EESPKELV EV+QYVL+ YQDVM E    TLPP RGIDHEI LLP ARP  KNVYHM P E A
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

A0A5D3DWT3 Reverse transcriptase2.7e-1875.76Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +VDEESPKELV E +QYVL+ YQDVM ESL +TLPP RGIDHEI LLPGARP TKNVYH    ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

A0A6J1EWT2 aspartic proteinase PCS1-like1.2e-1360.61Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +++E + +E V E I+ VL++Y D+MPESL +TLPPRRGIDHEI LLPG +P  KN Y MAP ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

A0A6J1EXV2 polygalacturonase-like1.2e-1360.61Show/hide
Query:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA
        +++E + +E V E I+ VL++Y D+MPESL +TLPPRRGIDHEI LLPG +P  KN Y MAP ELA
Subjt:  MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGATGAGGAAAGTCCAAAGGAACTAGTTCTGGAGGTGATCCAGTATGTGTTAAACAATTACCAAGATGTAATGCCAGAGAGTTTGCTTAGGACCCTACCTCCACG
AAGAGGTATAGATCATGAGATAAGACTTCTACCTGGGGCGAGACCCTCCACAAAGAATGTGTATCACATGGCACCGCTAGAATTAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGATGAGGAAAGTCCAAAGGAACTAGTTCTGGAGGTGATCCAGTATGTGTTAAACAATTACCAAGATGTAATGCCAGAGAGTTTGCTTAGGACCCTACCTCCACG
AAGAGGTATAGATCATGAGATAAGACTTCTACCTGGGGCGAGACCCTCCACAAAGAATGTGTATCACATGGCACCGCTAGAATTAGCATAG
Protein sequenceShow/hide protein sequence
MVDEESPKELVLEVIQYVLNNYQDVMPESLLRTLPPRRGIDHEIRLLPGARPSTKNVYHMAPLELA