; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027217 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027217
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:13375645..13376480
RNA-Seq ExpressionPI0027217
SyntenyPI0027217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]3.6e-1859.09Show/hide
Query:  STYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCG
        S+YNQI  TLD++A NNEEWD+D F +HRGGR K ++G+DRN +V  QGQMTAMNNLL+ M   QVNAA +S  +  Q+DE+GC+  G
Subjt:  STYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCG

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]1.8e-1452.58Show/hide
Query:  MLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDD-GMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCGGQLASD
        ML+S+Y QIKTTLD + +N++E  +DD       R + D GMDRN +VALQGQ+T M  LL+SMA+SQV+A GN + A  Q+DEM  VGCG    +D
Subjt:  MLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDD-GMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCGGQLASD

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]3.7e-2338.97Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH------RGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA
        ME FYFGL+K T Q+A+ VF  GML+S+YNQIK  LDTMASN++EW ++ FG+       +G R + +DG+D + +VALQGQ+  M N+L+SMA+ QVN 
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH------RGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA

Query:  AGNSMAAANQIDEMGCVGCG--------------------------------------------------GQLASDFSGRQQGSLPSNTEMPNQVGGSGK
          +S+    Q++EMGCVGC                                                   GQL SDFS R + S PSNTE PNQ      
Subjt:  AGNSMAAANQIDEMGCVGCG--------------------------------------------------GQLASDFSGRQQGSLPSNTEMPNQVGGSGK

Query:  EKCHD--TSQWKE
           +    S WKE
Subjt:  EKCHD--TSQWKE

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]7.5e-2457.55Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAA
        MEVFYFGL+K T Q  + +FV GML+S+YNQIK TLD+M++N++EWD+  FG+   GR K +G+D++ VV LQGQM AMNNLL+SM +SQVNAA N + A
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAA

Query:  ANQIDE
          Q+++
Subjt:  ANQIDE

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]1.0e-1747.75Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH---RGGRAK----DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA
        +E FYFGL++ TQQ  DAVF+ GML+ + N IKTTLD M SN++EW +++FG+H   +G R +    + G + N ++ LQ Q+T MN LL+SMA+SQ+NA
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH---RGGRAK----DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA

Query:  AGNSMAAANQI
         G+S+   +Q+
Subjt:  AGNSMAAANQI

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein3.6e-2457.55Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAA
        MEVFYFGL+K T Q  + +FV GML+S+YNQIK TLD+M++N++EWD+  FG+   GR K +G+D++ VV LQGQM AMNNLL+SM +SQVNAA N + A
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAA

Query:  ANQIDE
          Q+++
Subjt:  ANQIDE

A0A0A0L0Y4 Uncharacterized protein5.1e-1847.75Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH---RGGRAK----DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA
        +E FYFGL++ TQQ  DAVF+ GML+ + N IKTTLD M SN++EW +++FG+H   +G R +    + G + N ++ LQ Q+T MN LL+SMA+SQ+NA
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH---RGGRAK----DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA

Query:  AGNSMAAANQI
         G+S+   +Q+
Subjt:  AGNSMAAANQI

A0A5D3CC26 Uncharacterized protein1.8e-2338.97Show/hide
Query:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH------RGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA
        ME FYFGL+K T Q+A+ VF  GML+S+YNQIK  LDTMASN++EW ++ FG+       +G R + +DG+D + +VALQGQ+  M N+L+SMA+ QVN 
Subjt:  MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNH------RGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNA

Query:  AGNSMAAANQIDEMGCVGCG--------------------------------------------------GQLASDFSGRQQGSLPSNTEMPNQVGGSGK
          +S+    Q++EMGCVGC                                                   GQL SDFS R + S PSNTE PNQ      
Subjt:  AGNSMAAANQIDEMGCVGCG--------------------------------------------------GQLASDFSGRQQGSLPSNTEMPNQVGGSGK

Query:  EKCHD--TSQWKE
           +    S WKE
Subjt:  EKCHD--TSQWKE

A0A5D3CSC7 Uncharacterized protein1.7e-1859.09Show/hide
Query:  STYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCG
        S+YNQI  TLD++A NNEEWD+D F +HRGGR K ++G+DRN +V  QGQMTAMNNLL+ M   QVNAA +S  +  Q+DE+GC+  G
Subjt:  STYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAK-DDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCVGCG

A0A5D3CV99 Uncharacterized protein8.9e-1552.87Show/hide
Query:  FYFGLNKATQQTADAVFVDG-MLKSTYNQIKTTLDTMASNNEEWDEDDFGN------HRGGRAKDDGMDRNTVVALQGQMTAMNNLL
        FYFGL++ TQQT  A+FV G ML+S+YN+I+ TLD M +N++EW +D FG+      +RG + +DDG+DRN +VAL+GQ+T M+ LL
Subjt:  FYFGLNKATQQTADAVFVDG-MLKSTYNQIKTTLDTMASNNEEWDEDDFGN------HRGGRAKDDGMDRNTVVALQGQMTAMNNLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGTTCTATTTTGGACTGAACAAGGCAACACAGCAGACTGCTGATGCTGTGTTTGTAGACGGTATGTTGAAAAGTACATACAACCAGATTAAGACGACGCTGGA
TACGATGGCCAGCAACAACGAAGAATGGGATGAAGATGATTTTGGCAATCACCGAGGAGGACGAGCAAAAGATGATGGTATGGATAGGAACACCGTGGTGGCACTGCAGG
GACAAATGACTGCGATGAACAATTTGCTTAAATCAATGGCAATATCGCAAGTTAACGCCGCAGGAAACTCTATGGCTGCGGCTAACCAAATTGATGAAATGGGATGTGTG
GGATGCGGAGGTCAGCTAGCTAGTGATTTCTCCGGAAGACAACAAGGATCCCTCCCGAGTAATACAGAAATGCCAAATCAGGTAGGAGGATCTGGAAAAGAGAAGTGTCA
CGACACTTCGCAGTGGAAGGAATTTAACCATCCGCGATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGTTCTATTTTGGACTGAACAAGGCAACACAGCAGACTGCTGATGCTGTGTTTGTAGACGGTATGTTGAAAAGTACATACAACCAGATTAAGACGACGCTGGA
TACGATGGCCAGCAACAACGAAGAATGGGATGAAGATGATTTTGGCAATCACCGAGGAGGACGAGCAAAAGATGATGGTATGGATAGGAACACCGTGGTGGCACTGCAGG
GACAAATGACTGCGATGAACAATTTGCTTAAATCAATGGCAATATCGCAAGTTAACGCCGCAGGAAACTCTATGGCTGCGGCTAACCAAATTGATGAAATGGGATGTGTG
GGATGCGGAGGTCAGCTAGCTAGTGATTTCTCCGGAAGACAACAAGGATCCCTCCCGAGTAATACAGAAATGCCAAATCAGGTAGGAGGATCTGGAAAAGAGAAGTGTCA
CGACACTTCGCAGTGGAAGGAATTTAACCATCCGCGATCCTGA
Protein sequenceShow/hide protein sequence
MEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNHRGGRAKDDGMDRNTVVALQGQMTAMNNLLKSMAISQVNAAGNSMAAANQIDEMGCV
GCGGQLASDFSGRQQGSLPSNTEMPNQVGGSGKEKCHDTSQWKEFNHPRS