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PI0027225 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027225
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine-rich protein-related
Genome locationchr01:26964231..26964925
RNA-Seq ExpressionPI0027225
SyntenyPI0027225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]8.4e-3783.02Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD
        M NKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2974.76Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDK-TPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRL
        M NKTA  SS RLCLCAPTTHPGSFRCSLHRR   +S+K  PLPP G+QSKA + TD  L+KAFLMQ++KPSS DLQRRRNFQPKPSRFCN  AASD+ L
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDK-TPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRL

Query:  AVS
        AVS
Subjt:  AVS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-2976.92Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTD--HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHR
        M NKTA  SSSRLCLCAPT+HPGSFRCSLHRRP  +SDKT L  RGSQSKAAT T     L K FLMQ +KPSSHDL RRRNFQPKPSRFCN  AASDHR
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTD--HHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHR

Query:  LAVS
        L VS
Subjt:  LAVS

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]1.3e-3785.98Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS
        MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRR SNSS KT PLP   PRGSQSK AATTTDHHLLKAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV+AS
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS

Query:  DHRLAVS
        D RLAVS
Subjt:  DHRLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]9.9e-3883.96Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD
        MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein6.3e-3885.98Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS
        MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRR SNSS KT PLP   PRGSQSK AATTTDHHLLKAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV+AS
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-PLP---PRGSQSK-AATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS

Query:  DHRLAVS
        D RLAVS
Subjt:  DHRLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998224.8e-3883.96Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD
        MPNKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

A0A5A7UZ19 Uncharacterized protein4.1e-3783.02Show/hide
Query:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD
        M NKTA  SSSRLCLCAPTTHPGSFRCSLHRRPSNSS KTP    PP GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRR NFQPKPSRFCN+V+A D
Subjt:  MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPL---PPRGSQSKAA-TTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASD

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

A0A6A1UNQ3 Uncharacterized protein1.7e-1955.77Show/hide
Query:  PNKTASSSSSRLCLCAPTTHPGSFRCSLHR--RPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS-DHR
        P    S +++R CLCAPTTHPGSFRCS+HR  RP     +  +    SQ + A  T  + L+AFL+ I+KPSSHDLQRRRNFQPKPSRFC +   S DH 
Subjt:  PNKTASSSSSRLCLCAPTTHPGSFRCSLHR--RPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAAS-DHR

Query:  LAVS
        +AVS
Subjt:  LAVS

A0A6J1DD51 uncharacterized protein LOC1110193813.9e-2468.82Show/hide
Query:  MPNKTA--SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV
        M  KTA  S+S+SRLCLCAPTTHPGSFRCSLHRRP  +SDK+      + S         L+KAFLMQI+KPSSHDLQRRRNFQPKPSRFCNV
Subjt:  MPNKTA--SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein4.0e-0552.94Show/hide
Query:  SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT
        +S +  +C+C+PTTHPGSF+C LHR PS   +K+
Subjt:  SSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT

AT5G11090.1 serine-rich protein-related4.9e-1135.24Show/hide
Query:  SRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV
        SR C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++                   ++  L  +++PSSH L+RR  +QP+PSR  ++
Subjt:  SRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV

Query:  VAASD
        +A +D
Subjt:  VAASD

AT5G20370.1 serine-rich protein-related1.5e-0731.19Show/hide
Query:  TASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-------------------------PLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRR
        +++  + R CLC+PTTHPGSFRCS HRR  +   KT                          L    S +K  +       ++    + KPSS    RR 
Subjt:  TASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKT-------------------------PLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRR

Query:  NFQPKPSRF
         F+P+ SRF
Subjt:  NFQPKPSRF

AT5G25280.1 serine-rich protein-related2.4e-1033.02Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCN
        S R C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++                   ++  L  +++PSSH L+RR  ++P+ SR  +
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCN

Query:  VVAASD
        +  A D
Subjt:  VVAASD

AT5G25280.2 serine-rich protein-related2.4e-1033.02Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCN
        S R C+C+PTTHPGSFRCSLH+  +N        P G  + + TT   ++                   ++  L  +++PSSH L+RR  ++P+ SR  +
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHL-------------------LKAFLMQIVKPSSHDLQRRRNFQPKPSRFCN

Query:  VVAASD
        +  A D
Subjt:  VVAASD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAACAAAACCGCTTCCTCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGCCCGTCGAATTCCTC
CGACAAAACGCCGCTTCCTCCTCGTGGAAGCCAATCGAAGGCGGCAACGACGACGGATCATCATCTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATG
ATCTTCAAAGACGGAGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATGTTGTTGCCGCTTCGGATCATCGTTTGGCTGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AAATATTTGCATAAATAAAAACGCCGAAAAGCGAAGTCAGTCAATTCTCACATGCAAATGTAAAAGTTAGAACTTCCCAGTTCCAATGCCGAACAAAACCGCTTCCTCTT
CCTCTTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGCCCGTCGAATTCCTCCGACAAAACGCCGCTTCCTCCTCGT
GGAAGCCAATCGAAGGCGGCAACGACGACGGATCATCATCTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGAGAAATTTCCA
GCCTAAACCTTCTCGATTCTGCAATGTTGTTGCCGCTTCGGATCATCGTTTGGCTGTTTCTTGATCGTGAATCGCGTACGTATACATACATATGTGATTGACGATTTGTA
ACTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAAAGTGAAATTGGAAACGTGATTAAGCGTTTCTGATCTTTGTTTTGAGAT
TAATTTATGGAATTGTTAGGGCATTTGAACTGAAATTGGTGTAATTTGTATATAATTGGCGGATTAGTAGACTGATGTTGTAAATAGTGAGAGAACTACAACTTTTATGA
AACATAAAAATAGTTTCGAATATTGGAGAAGAAAT
Protein sequenceShow/hide protein sequence
MPNKTASSSSSRLCLCAPTTHPGSFRCSLHRRPSNSSDKTPLPPRGSQSKAATTTDHHLLKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVAASDHRLAVS