; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027234 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027234
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNase III domain-containing protein
Genome locationchr01:3443517..3446982
RNA-Seq ExpressionPI0027234
SyntenyPI0027234
Gene Ontology termsGO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR014720 - Double-stranded RNA-binding domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572281.1 Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]3.3e-12083.88Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME    R DLL+++   RGGE+     + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF K+IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTEMCQKRNLK EF D WEE KEI VLIDKQ+VGKGSY KKLIAQNRAAKDALDN  T L QFN+PCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

XP_004144598.1 ribonuclease 3-like protein 3 [Cucumis sativus]3.0e-14294.91Show/hide
Query:  MEEGEQRVDLLEEKDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
        MEEG++RVD LE KDGSR  GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
Subjt:  MEEGEQRVDLLEEKDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT

Query:  RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKK
        RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFG+SIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEPLITLKTMKK
Subjt:  RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKK

Query:  HPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        HPMTELTEMCQKR+LKLEFRDRWEETKEIEVLI+KQVVGKGSYRKKLIAQNRAAK+AL+NLDTF PQFNQPCQPM
Subjt:  HPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

XP_022969213.1 ribonuclease 3-like protein 3 [Cucurbita maxima]5.0e-12184.25Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME G   VDLL++       E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF K+IEEYPLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTEMCQKRNLK EF D WEE KEI VLIDKQ+VGKGSY KKLIAQNRAAKDALDN  T L QFN+PCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

XP_023554575.1 ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]2.3e-12184.62Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME G    DLLE++   RGGE+     + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF K+IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTEMCQKRNLK EF D WEE KEI VLIDKQ+VGKGSY KKLIAQNRAAKDALDN  T L QFN+PCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

XP_038888348.1 ribonuclease 3-like protein 3 [Benincasa hispida]5.4e-13189.01Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        MEE EQRV  LEE+  S GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNK DLH KIEEF KSIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSNSI+ VWKIFK+LMEPLITLKTMKKHP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTE+CQKRNL LEF D WEE KE++V IDKQ+VGKGSYRKKLIAQNRAAKDAL+NLD  L +FNQPCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

TrEMBL top hitse value%identityAlignment
A0A0A0K1J8 RNase III domain-containing protein1.5e-14294.91Show/hide
Query:  MEEGEQRVDLLEEKDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
        MEEG++RVD LE KDGSR  GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT
Subjt:  MEEGEQRVDLLEEKDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT

Query:  RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKK
        RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFG+SIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEPLITLKTMKK
Subjt:  RLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKK

Query:  HPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        HPMTELTEMCQKR+LKLEFRDRWEETKEIEVLI+KQVVGKGSYRKKLIAQNRAAK+AL+NLDTF PQFNQPCQPM
Subjt:  HPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

A0A1Q3BNT8 Ribonuclease_3 domain-containing protein (Fragment)6.7e-7966.67Show/hide
Query:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  PNL PG LTRLRAANVDTEKLARV+I HG HRYL H K  L
Subjt:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWEETKEIEV
         Q+I+EF ++I +YPLHSNG++  PKVLADIVESTIGAVF DSN SIDIVWK+FK L+EP+I+++T+K+HP+TEL E+CQK+NLK++F D W+E+   EV
Subjt:  HQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWEETKEIEV

Query:  LIDKQVVGKGSY-RKKLIAQNRAAKDALDNL
         ID Q+VG+ +Y  KK IA NRAAKDAL+N+
Subjt:  LIDKQVVGKGSY-RKKLIAQNRAAKDALDNL

A0A6J1C375 ribonuclease 3-like protein 36.9e-11677.7Show/hide
Query:  EQRVDLLEEKDGSRGGEAVN---------GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG
        E  V+L E+      G  VN          S+SP SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPG
Subjt:  EQRVDLLEEKDGSRGGEAVN---------GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG

Query:  SLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKT
        SLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL +KIEEF + ++EYPLHSNG+IKAPK+LADIVESTIGAVF DSNS+D VW IF+ LMEPLITLKT
Subjt:  SLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKT

Query:  MKKHPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        +K+HPMTELTE+CQKRNLKLEF D WE+TKE++V IDKQ+VGKGSYRKKLIAQNRAAKDAL+NLDT L Q NQPCQPM
Subjt:  MKKHPMTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

A0A6J1GKQ4 ribonuclease 3-like protein 36.0e-12083.52Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME G    DLL+++   RGGE+     + ASLDG+EAIL YEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF K+IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTEMCQKRNLK EF D WEE KEI VLIDKQ+VGKGSY KKLIAQNRAAKDALDN  T L QFN+PCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

A0A6J1I0C1 ribonuclease 3-like protein 32.4e-12184.25Show/hide
Query:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME G   VDLL++       E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNKADL QKIEEF K+IEEYPLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM
        MTELTEMCQKRNLK EF D WEE KEI VLIDKQ+VGKGSY KKLIAQNRAAKDALDN  T L QFN+PCQPM
Subjt:  MTELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM

SwissProt top hitse value%identityAlignment
Q69KJ0 Ribonuclease 3-like protein 31.4e-6050.62Show/hide
Query:  PASLDGIEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        P  +  +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L PG LTRLRAANVD EKLARVA+ HG H +LRH 
Subjt:  PASLDGIEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQK--RNLKLEFRDRWEE
          +L  +I +F + +  YP+HSNG++  PKVL D+VES IGA++ DSN + +IVW++F++L +PLI+L+T+ KHP++EL E CQK  R +K+  +D W++
Subjt:  KADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQK--RNLKLEFRDRWEE

Query:  TKEIEVLIDKQVVGKGSY-RKKLIAQNRAAKDALDNLDTFLPQ
           +EVLID ++VG+ +Y +KK IAQNRAAK ALD L   L Q
Subjt:  TKEIEVLIDKQVVGKGSY-RKKLIAQNRAAKDALDNLDTFLPQ

Q6ATG6 Ribonuclease 3-like protein 27.7e-4040Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKI
        +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L PG L+ LRAAN+ TEKLARVA+ H  +  LR N   L   +
Subjt:  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKI

Query:  EEFGKSIEEYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWEE--T
         +F +++++ P        +   ++KAPKVLADIVE+   AV+ D    ++ +WK+ + L EP+IT +T+ + P+T L E+CQK     +F+  W++   
Subjt:  EEFGKSIEEYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWEE--T

Query:  KEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNL
          + V +  ++VG GS  +K+IA+  AA+DA   L
Subjt:  KEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNL

Q8LMR2 Endoribonuclease Dicer homolog 18.3e-4242.31Show/hide
Query:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L
Subjt:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HQKIEEFGKSIEEYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWE
          +I EF K ++E  L         G  KAPKVL DIVES  GA+F DS     +VWK+F+ L+ P++T +T+  HP+ EL E CQ++   LE++  R  
Subjt:  HQKIEEFGKSIEEYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWE

Query:  ETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL
            +EV +D   +G     +K +AQ  AA++AL
Subjt:  ETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL

Q9LTQ0 Ribonuclease 3-like protein 22.0e-4037.65Show/hide
Query:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT
        S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ 
Subjt:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT

Query:  HGFHRYLRHNKADLHQKIEEFGKSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK
        HG + +LR N   L +K++EF +++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL  ++K   P++ L ++C K
Subjt:  HGFHRYLRHNKADLHQKIEEFGKSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK

Query:  RNLKLEFRDRWEETKEIEVL-IDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLP
           +++ ++  +    I V+ +D +++  G    K IA+  AAK+AL  L    P
Subjt:  RNLKLEFRDRWEETKEIEVL-IDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLP

Q9SP32 Endoribonuclease Dicer homolog 14.4e-4344.16Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK

Query:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL
         +EV ID   VG     +K +AQ  AA++AL
Subjt:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 13.1e-4444.16Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK

Query:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL
         +EV ID   VG     +K +AQ  AA++AL
Subjt:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL

AT1G01040.2 dicer-like 13.1e-4444.16Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK
        I EF K ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGKSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWEETK

Query:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL
         +EV ID   VG     +K +AQ  AA++AL
Subjt:  EIEVLIDKQVVGKGSYRKKLIAQNRAAKDAL

AT3G03300.1 dicer-like 26.1e-3238.6Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        +E++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LSPG LT +R+A+V+ E  A VA+    H+++ +    LH+ 
Subjt:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGKSIEEYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKL----EFRDRWEET
        I       E+  L S       I  PKVL D++ES  GA+F DS  + ++V+   K L+  +IT +T+K HP+ ELTE+CQK   +L    +F     E 
Subjt:  IEEFGKSIEEYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKL----EFRDRWEET

Query:  KEIEVLI-------DKQVVGKGSYRKKL
        K  E+         DK++  K +Y++ L
Subjt:  KEIEVLI-------DKQVVGKGSYRKKL

AT3G20420.1 RNAse THREE-like protein 21.4e-4137.65Show/hide
Query:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT
        S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ 
Subjt:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT

Query:  HGFHRYLRHNKADLHQKIEEFGKSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK
        HG + +LR N   L +K++EF +++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL  ++K   P++ L ++C K
Subjt:  HGFHRYLRHNKADLHQKIEEFGKSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK

Query:  RNLKLEFRDRWEETKEIEVL-IDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLP
           +++ ++  +    I V+ +D +++  G    K IA+  AAK+AL  L    P
Subjt:  RNLKLEFRDRWEETKEIEVL-IDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLP

AT4G15417.1 RNAse II-like 11.1e-6552.11Show/hide
Query:  GEQRVDLLEEKDGSRG-GEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRA
        G Q  + ++ KD ++  G A    D    ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +GDS+LN  I  +     P  +PG LT+LRA
Subjt:  GEQRVDLLEEKDGSRG-GEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRA

Query:  ANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMT
         NVDTEKLARVA+ H  + YLRH K  L ++I EF +++E+YPLHSNG++K PKVLADIVESTIGA+F D NS + VWK+ K L+EP+I L  MK HPMT
Subjt:  ANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMT

Query:  ELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYR-KKLIAQNRAAKDALDNLDTF
        EL EMCQKRNLKL  +D WEE +     I+ + VG G +  KK  A+N AAK+A+DN   F
Subjt:  ELTEMCQKRNLKLEFRDRWEETKEIEVLIDKQVVGKGSYR-KKLIAQNRAAKDALDNLDTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGGAGAACAGAGAGTGGATTTATTGGAAGAGAAAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGC
GATTTTGAACTACGAGTTTCGAGACAAGAGATTACTGGAAGAGGCTTTTACAGACGCTTCGTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAG
ATTCTGTGTTGAATTTTCTGATAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTT
GCTCGAGTAGCGATTACACATGGATTTCATCGGTATCTTCGCCACAACAAAGCTGATCTTCATCAAAAAATAGAAGAGTTTGGTAAAAGTATAGAGGAATATCCATTACA
TTCCAATGGAATGATAAAAGCTCCAAAAGTCCTAGCCGATATTGTTGAATCAACCATTGGAGCAGTTTTCGCTGATAGCAACTCCATTGACATTGTTTGGAAGATATTTA
AGGAATTAATGGAGCCATTGATAACGTTGAAGACAATGAAGAAACATCCAATGACAGAGTTGACAGAAATGTGCCAAAAAAGAAACCTAAAGTTGGAATTTAGGGACCGT
TGGGAAGAAACAAAAGAGATAGAAGTTTTGATTGACAAACAAGTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATTGCACAAAATAGAGCTGCTAAAGATGCTTTGGA
CAACTTGGATACATTTCTTCCACAATTTAATCAACCTTGTCAACCTATGTAA
mRNA sequenceShow/hide mRNA sequence
AGAGAGGAAGAGAGGAAGAGAGGAAGAGAGGAAGAGAGGAAGAAATCCCCACAGCCAACGAGATAAAATTAAGTTTTGGTTTCAGAATCCCCAAAATTCCGGCATGGAAG
AAGGAGAACAGAGAGTGGATTTATTGGAAGAGAAAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCGATTTTG
AACTACGAGTTTCGAGACAAGAGATTACTGGAAGAGGCTTTTACAGACGCTTCGTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCTGT
GTTGAATTTTCTGATAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGGCTCCGAGCGGCGAATGTGGACACGGAAAAGCTTGCTCGAG
TAGCGATTACACATGGATTTCATCGGTATCTTCGCCACAACAAAGCTGATCTTCATCAAAAAATAGAAGAGTTTGGTAAAAGTATAGAGGAATATCCATTACATTCCAAT
GGAATGATAAAAGCTCCAAAAGTCCTAGCCGATATTGTTGAATCAACCATTGGAGCAGTTTTCGCTGATAGCAACTCCATTGACATTGTTTGGAAGATATTTAAGGAATT
AATGGAGCCATTGATAACGTTGAAGACAATGAAGAAACATCCAATGACAGAGTTGACAGAAATGTGCCAAAAAAGAAACCTAAAGTTGGAATTTAGGGACCGTTGGGAAG
AAACAAAAGAGATAGAAGTTTTGATTGACAAACAAGTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATTGCACAAAATAGAGCTGCTAAAGATGCTTTGGACAACTTG
GATACATTTCTTCCACAATTTAATCAACCTTGTCAACCTATGTAATTTCATCTACTCTCACACACACATACTTTTATATATATATATATATATATATAT
Protein sequenceShow/hide protein sequence
MEEGEQRVDLLEEKDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKL
ARVAITHGFHRYLRHNKADLHQKIEEFGKSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDR
WEETKEIEVLIDKQVVGKGSYRKKLIAQNRAAKDALDNLDTFLPQFNQPCQPM