; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027257 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027257
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:9774803..9775662
RNA-Seq ExpressionPI0027257
SyntenyPI0027257
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035005.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.7e-4657.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAME---IPNTPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PK
        MA T E EV EHKEQSDSS+SD HWKRL  KAK S DD  E   SA++      TPV+RP EQS  P+AL EEIHR KM V  KDIG  +PLSKG   PK
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAME---IPNTPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PK

Query:  APLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ------------------------------------LRPEIATVLSGIAKIHADNLTPLEEYLNS
        APL+K+ STHAPL+ SE PLDTS +Q   +P PSQ                                    LRP+IATVLSGI KIHAD LTPLEEYLNS
Subjt:  APLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ------------------------------------LRPEIATVLSGIAKIHADNLTPLEEYLNS

Query:  YLKRVDSFNDVQSS
        YLKRVD+FNDVQSS
Subjt:  YLKRVDSFNDVQSS

KAA0050984.1 hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa]4.1e-3961.4Show/hide
Query:  EREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----TPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLE
        E E+KEHK++S+S +SDRHWKR   KAK S+DD      SA+ +P+    TPV++P +QS  P+ LLEEI R KM V  KDIG  +P SKG   PKAPL+
Subjt:  EREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----TPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLE

Query:  KVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDV
        KV ST APLK SE  LDTS +Q   +PEPSQLR EI TVLS I KIHAD L PLEEYLNSYLKR D+FNDV
Subjt:  KVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDV

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.8e-3952.09Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP  E EV EH  +SDS++SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLN
        S  P+ LLEEI R KM V  KD+   +P SK    PKA L+KV S HAPLK SE PL  S KQ + +PEPSQLRPEIATVLSGI KIHAD L  LEEYLN
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLN

Query:  SYLKRVDSFNDVQSS
        SYLKRV++FNDVQSS
Subjt:  SYLKRVDSFNDVQSS

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]7.0e-3947.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP    EVKEHK++SDSS+SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------
        S  P+ALLEEI R KM V EKD+   +PLSK    PKA L+KV S HAPLK SE PL  S K+   +PEPSQ                            
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------

Query:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS
                LRPEIATVLSGI KIHAD LT LEEYLNSYLKRVD+FNDVQSS
Subjt:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]7.0e-3947.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP    EVKEHK++SDSS+SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------
        S  P+ALLEEI R KM V EKD+   +PLSK    PKA L+KV S HAPLK SE PL  S K+   +PEPSQ                            
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------

Query:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS
                LRPEIATVLSGI KIHAD LT LEEYLNSYLKRVD+FNDVQSS
Subjt:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS

TrEMBL top hitse value%identityAlignment
A0A5A7U6Q5 Uncharacterized protein2.0e-3961.4Show/hide
Query:  EREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----TPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLE
        E E+KEHK++S+S +SDRHWKR   KAK S+DD      SA+ +P+    TPV++P +QS  P+ LLEEI R KM V  KDIG  +P SKG   PKAPL+
Subjt:  EREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----TPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLE

Query:  KVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDV
        KV ST APLK SE  LDTS +Q   +PEPSQLR EI TVLS I KIHAD L PLEEYLNSYLKR D+FNDV
Subjt:  KVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDV

A0A5A7UGW6 PMD domain-containing protein8.9e-4052.09Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP  E EV EH  +SDS++SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLN
        S  P+ LLEEI R KM V  KD+   +P SK    PKA L+KV S HAPLK SE PL  S KQ + +PEPSQLRPEIATVLSGI KIHAD L  LEEYLN
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLN

Query:  SYLKRVDSFNDVQSS
        SYLKRV++FNDVQSS
Subjt:  SYLKRVDSFNDVQSS

A0A5A7V2J6 Uncharacterized protein3.4e-3947.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP    EVKEHK++SDSS+SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------
        S  P+ALLEEI R KM V EKD+   +PLSK    PKA L+KV S HAPLK SE PL  S K+   +PEPSQ                            
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------

Query:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS
                LRPEIATVLSGI KIHAD LT LEEYLNSYLKRVD+FNDVQSS
Subjt:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS

A0A5D3BT42 Putative mitochondrial protein3.7e-4657.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAME---IPNTPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PK
        MA T E EV EHKEQSDSS+SD HWKRL  KAK S DD  E   SA++      TPV+RP EQS  P+AL EEIHR KM V  KDIG  +PLSKG   PK
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAME---IPNTPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PK

Query:  APLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ------------------------------------LRPEIATVLSGIAKIHADNLTPLEEYLNS
        APL+K+ STHAPL+ SE PLDTS +Q   +P PSQ                                    LRP+IATVLSGI KIHAD LTPLEEYLNS
Subjt:  APLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ------------------------------------LRPEIATVLSGIAKIHADNLTPLEEYLNS

Query:  YLKRVDSFNDVQSS
        YLKRVD+FNDVQSS
Subjt:  YLKRVDSFNDVQSS

A0A5D3BW91 Uncharacterized protein3.4e-3947.01Show/hide
Query:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ
        MAP    EVKEHK++SDSS+SDRHWKR   KAK S D     GLSA+E+P+                                        TPV +P EQ
Subjt:  MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPN----------------------------------------TPVARPVEQ

Query:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------
        S  P+ALLEEI R KM V EKD+   +PLSK    PKA L+KV S HAPLK SE PL  S K+   +PEPSQ                            
Subjt:  SSHPTALLEEIHRDKMKVNEKDIGKSNPLSKG---PKAPLEKVKSTHAPLKISEPPLDTSKKQIVGHPEPSQ----------------------------

Query:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS
                LRPEIATVLSGI KIHAD LT LEEYLNSYLKRVD+FNDVQSS
Subjt:  --------LRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTACCCACGAGAGGGAGGTCAAGGAGCACAAAGAGCAGAGTGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACTTTCAAATAAAGCAAAAACATCAAATGA
TGATTCCTGTGAAGGAGGTTTAAGTGCTATGGAAATTCCTAATACACCAGTTGCCAGACCAGTTGAACAATCCTCACATCCTACTGCTCTTCTTGAGGAGATTCATCGGG
ATAAGATGAAGGTGAATGAAAAAGATATTGGAAAATCAAATCCTCTGTCCAAAGGCCCCAAAGCGCCTTTAGAGAAGGTCAAATCCACGCATGCGCCTCTCAAGATTTCT
GAGCCGCCTTTAGACACTTCTAAAAAACAGATAGTAGGACATCCTGAGCCTTCTCAACTTAGACCGGAAATAGCAACGGTCCTTTCGGGAATTGCAAAGATCCATGCAGA
CAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTGAAAAGGGTAGACAGCTTTAATGATGTACAATCTTCAATTCCGCACAGTTATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTACCCACGAGAGGGAGGTCAAGGAGCACAAAGAGCAGAGTGATAGCAGCAGAAGCGATCGTCATTGGAAGAGACTTTCAAATAAAGCAAAAACATCAAATGA
TGATTCCTGTGAAGGAGGTTTAAGTGCTATGGAAATTCCTAATACACCAGTTGCCAGACCAGTTGAACAATCCTCACATCCTACTGCTCTTCTTGAGGAGATTCATCGGG
ATAAGATGAAGGTGAATGAAAAAGATATTGGAAAATCAAATCCTCTGTCCAAAGGCCCCAAAGCGCCTTTAGAGAAGGTCAAATCCACGCATGCGCCTCTCAAGATTTCT
GAGCCGCCTTTAGACACTTCTAAAAAACAGATAGTAGGACATCCTGAGCCTTCTCAACTTAGACCGGAAATAGCAACGGTCCTTTCGGGAATTGCAAAGATCCATGCAGA
CAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTGAAAAGGGTAGACAGCTTTAATGATGTACAATCTTCAATTCCGCACAGTTATTGTTGA
Protein sequenceShow/hide protein sequence
MAPTHEREVKEHKEQSDSSRSDRHWKRLSNKAKTSNDDSCEGGLSAMEIPNTPVARPVEQSSHPTALLEEIHRDKMKVNEKDIGKSNPLSKGPKAPLEKVKSTHAPLKIS
EPPLDTSKKQIVGHPEPSQLRPEIATVLSGIAKIHADNLTPLEEYLNSYLKRVDSFNDVQSSIPHSYC