; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027272 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027272
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr07:19075262..19075588
RNA-Seq ExpressionPI0027272
SyntenyPI0027272
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035842.1 uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa]2.5e-3980.56Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQVVIIDKLPSLWKDFKNTLRHKTKKFSIESLITW
        M+ AKEVWDALQKKY+ EE  SKKY VSRYL+YQM DD+SVEAQSHEIQKIAH+II++ M LD+QFQVVIIDKLP LWKDFKNTLRHKTK+FS+ESLIT 
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQVVIIDKLPSLWKDFKNTLRHKTKKFSIESLITW

Query:  LRIEEEAR
        LRIEEE R
Subjt:  LRIEEEAR

KAA0049683.1 uncharacterized protein E6C27_scaffold76G00220 [Cucumis melo var. makuwa]1.9e-3982.57Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AKEVWD LQKKY+TEEARSKKY VSRYLRYQM DDR VEAQSHEIQKIAH+II++ M LD+QFQ VVIIDKLP LWKDFKNTLR+KTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         LRIEEEAR
Subjt:  WLRIEEEAR

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]2.9e-4083.49Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AKEVWDALQKKY+TEEA SKKY VSRYLRYQM DD+SVEAQSHEIQKIAH+II++ M LD+QFQ VVIIDKLP LWKDFKNTLRHKTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         LRIEEEAR
Subjt:  WLRIEEEAR

KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]1.9e-3980.73Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+  KEVWDALQKKY+T+EARSKKY VSRYLRYQM DD+SVE QSHEIQKIAH+II++ M LD+QFQV VIIDKLP LWKDFKNTLRHKTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         L+IEEEAR
Subjt:  WLRIEEEAR

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]4.3e-3979.82Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AK+VW+ALQKKY+TEEA SKKY VSRYLRYQM DDRSVEAQSHEIQKIAH+IIN+ M LD+QFQV +IIDKLP LWKDFKNTLRHKTK+FS+E+LIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         L+IEEEA+
Subjt:  WLRIEEEAR

TrEMBL top hitse value%identityAlignment
A0A5A7SXC2 Uncharacterized protein1.2e-3980.56Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQVVIIDKLPSLWKDFKNTLRHKTKKFSIESLITW
        M+ AKEVWDALQKKY+ EE  SKKY VSRYL+YQM DD+SVEAQSHEIQKIAH+II++ M LD+QFQVVIIDKLP LWKDFKNTLRHKTK+FS+ESLIT 
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQVVIIDKLPSLWKDFKNTLRHKTKKFSIESLITW

Query:  LRIEEEAR
        LRIEEE R
Subjt:  LRIEEEAR

A0A5A7UYY4 Uncharacterized protein1.4e-4083.49Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AKEVWDALQKKY+TEEA SKKY VSRYLRYQM DD+SVEAQSHEIQKIAH+II++ M LD+QFQ VVIIDKLP LWKDFKNTLRHKTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         LRIEEEAR
Subjt:  WLRIEEEAR

A0A5D3BDS3 Uncharacterized protein2.1e-3979.82Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AK+VW+ALQKKY+TEEA SKKY VSRYLRYQM DDRSVEAQSHEIQKIAH+IIN+ M LD+QFQV +IIDKLP LWKDFKNTLRHKTK+FS+E+LIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         L+IEEEA+
Subjt:  WLRIEEEAR

A0A5D3CPF2 Uncharacterized protein9.2e-4082.57Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+ AKEVWD LQKKY+TEEARSKKY VSRYLRYQM DDR VEAQSHEIQKIAH+II++ M LD+QFQ VVIIDKLP LWKDFKNTLR+KTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQ-VVIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         LRIEEEAR
Subjt:  WLRIEEEAR

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein9.2e-4080.73Show/hide
Query:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT
        M+  KEVWDALQKKY+T+EARSKKY VSRYLRYQM DD+SVE QSHEIQKIAH+II++ M LD+QFQV VIIDKLP LWKDFKNTLRHKTK+FS+ESLIT
Subjt:  MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLIT

Query:  WLRIEEEAR
         L+IEEEAR
Subjt:  WLRIEEEAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein2.6e-1035.29Show/hide
Query:  AKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLITWLR
        AKE+WD L+  Y  +E++SK+  V +Y+ ++M+++R +  Q     KIA  I++  M LDE F V  II K P  W+ F   L  +      E L  W+ 
Subjt:  AKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQV-VIIDKLPSLWKDFKNTLRHKTKKFSIESLITWLR

Query:  IE
        +E
Subjt:  IE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCTGCAAAAGAGGTCTGGGATGCATTACAAAAGAAGTATAATACAGAGGAAGCCAGATCCAAGAAGTACGTGGTAAGTAGATACTTGCGGTATCAAATGATTGA
CGACAGATCAGTGGAGGCTCAATCACACGAGATACAAAAAATTGCACATGACATAATCAACAAAGATATGTCACTCGATGAACAATTTCAAGTTGTTATTATTGACAAGC
TACCTTCACTGTGGAAGGATTTTAAGAACACTCTAAGGCATAAGACGAAGAAGTTCTCTATAGAGAGTCTTATCACTTGGCTAAGGATTGAGGAGGAGGCTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCTGCAAAAGAGGTCTGGGATGCATTACAAAAGAAGTATAATACAGAGGAAGCCAGATCCAAGAAGTACGTGGTAAGTAGATACTTGCGGTATCAAATGATTGA
CGACAGATCAGTGGAGGCTCAATCACACGAGATACAAAAAATTGCACATGACATAATCAACAAAGATATGTCACTCGATGAACAATTTCAAGTTGTTATTATTGACAAGC
TACCTTCACTGTGGAAGGATTTTAAGAACACTCTAAGGCATAAGACGAAGAAGTTCTCTATAGAGAGTCTTATCACTTGGCTAAGGATTGAGGAGGAGGCTAGATAG
Protein sequenceShow/hide protein sequence
MSPAKEVWDALQKKYNTEEARSKKYVVSRYLRYQMIDDRSVEAQSHEIQKIAHDIINKDMSLDEQFQVVIIDKLPSLWKDFKNTLRHKTKKFSIESLITWLRIEEEAR