; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027325 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027325
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:13747332..13747496
RNA-Seq ExpressionPI0027325
SyntenyPI0027325
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034857.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1473.58Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRN
        MTN +IPDD+DE  S++ATTVGDDIHY+E SNEWS+WRDEL ++MFSD ELRN
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRN

KAA0060101.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.1e-1579.63Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN NI DD+DE DST+ATTVGDDIHYIE SNEW+ WRDEL E+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1475.93Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN +I D++DE DST+ATT  DDIHYIE SNEWSQWRD+LAE+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1475.93Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN +I D++DE DST+ATT  DDIHYIE SNEWSQWRD+LAE+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

XP_008442271.1 PREDICTED: uncharacterized protein LOC103486178 [Cucumis melo]2.1e-1579.63Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN NI DD+DE DST+ATTVGDDIHYIE SNEW+ WRDEL E+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

TrEMBL top hitse value%identityAlignment
A0A1S3B5B3 uncharacterized protein LOC1034861781.0e-1579.63Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN NI DD+DE DST+ATTVGDDIHYIE SNEW+ WRDEL E+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

A0A5A7VJX3 Retrotransposon protein1.5e-1475.93Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN +I D++DE DST+ATT  DDIHYIE SNEWSQWRD+LAE+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

A0A5D3BCB2 Retrotransposon protein1.5e-1473.58Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRN
        MTN +IPDD+DE  S++ATTVGDDIHY+E SNEWS+WRDEL ++MFSD ELRN
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRN

A0A5D3BL48 Putative nuclease HARBI11.5e-1475.93Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN +I D++DE DST+ATT  DDIHYIE SNEWSQWRD+LAE+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

A0A5D3CA52 Putative nuclease HARBI11.0e-1579.63Show/hide
Query:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ
        MTN NI DD+DE DST+ATTVGDDIHYIE SNEW+ WRDEL E+MFSD ELRNQ
Subjt:  MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGCTAATATACCAGATGACGTAGATGAGGGTGACTCGACATACGCGACCACTGTAGGTGACGATATTCATTACATAGAGATCTCGAATGAATGGAGTCAATG
GAGGGACGAGCTTGCTGAAAAAATGTTCAGTGATTTGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGCTAATATACCAGATGACGTAGATGAGGGTGACTCGACATACGCGACCACTGTAGGTGACGATATTCATTACATAGAGATCTCGAATGAATGGAGTCAATG
GAGGGACGAGCTTGCTGAAAAAATGTTCAGTGATTTGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNANIPDDVDEGDSTYATTVGDDIHYIEISNEWSQWRDELAEKMFSDLELRNQ