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PI0027334 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027334
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:2692527..2694034
RNA-Seq ExpressionPI0027334
SyntenyPI0027334
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]7.7e-5070.92Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+G+PNDKC +++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPD+ANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.4e-5072.26Show/hide
Query:  KVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTTAI
        KV KCGVCGL+G+PNDKCL ++E+ N++R+YDP  NTYN+GWRDNPNLRWGN+NQ+  QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+QLTTAI
Subjt:  KVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTTAI

Query:  SKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        SK++GK KLPAQPD+ANVSAISLRSGKIL     K++
Subjt:  SKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

KAA0062400.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-4969.5Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCL+++E+ N++R+Y+P GNTYN+ WR+ PNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.9e-4970.21Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQ-QAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G   KV KCGVCGL+G+PNDKC +++E+ N++R+YDP GNTYN GWRD PNLRWGN+ Q   QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQ-QAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

TYK26581.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-4969.5Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCL+++E+ N++R+Y+P GNTYN+ WR+ PNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

TrEMBL top hitse value%identityAlignment
A0A5A7V0Q7 Retrotransposon gag protein1.7e-5072.26Show/hide
Query:  KVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTTAI
        KV KCGVCGL+G+PNDKCL ++E+ N++R+YDP  NTYN+GWRDNPNLRWGN+NQ+  QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+QLTTAI
Subjt:  KVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTTAI

Query:  SKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        SK++GK KLPAQPD+ANVSAISLRSGKIL     K++
Subjt:  SKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

A0A5A7V594 Retrotransposon gag protein8.3e-5069.5Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCL+++E+ N++R+Y+P GNTYN+ WR+ PNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

A0A5D3CFE7 Retrotransposon gag protein1.4e-4970.21Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQ-QAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G   KV KCGVCGL+G+PNDKC +++E+ N++R+YDP GNTYN GWRD PNLRWGN+ Q   QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQ-QAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

A0A5D3DS57 Retrotransposon gag protein8.3e-5069.5Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCL+++E+ N++R+Y+P GNTYN+ WR+ PNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPDHANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

E5GBZ4 Retrotransposon gag protein3.7e-5070.92Show/hide
Query:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+G+PNDKC +++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-AQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR
        TTAISK++GK KLPAQPD+ANVSAISLRSGKIL     K++
Subjt:  TTAISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGCCGGGGAGCTTCGGTGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAGGAAATCCTAATGACAAGTGCCTTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTATGATCCCCAAGGAAATACTTACAATGCCGGTTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAAGCACAAGCAACTTCTT
CTTCAAATAATCAAGGTACAAATTTAGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAGATGTCTCAATTAACCACTGCA
ATAAGTAAGTTAGAAGGCAAAGTTAAGCTGCCTGCTCAGCCTGACCACGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGCAACCCCTCCAAGTGAAGAA
AAGGTACTTTCTAACCCTGACCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGCCGGGGAGCTTCGGTGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAGGAAATCCTAATGACAAGTGCCTTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTATGATCCCCAAGGAAATACTTACAATGCCGGTTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAAGCACAAGCAACTTCTT
CTTCAAATAATCAAGGTACAAATTTAGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAGATGTCTCAATTAACCACTGCA
ATAAGTAAGTTAGAAGGCAAAGTTAAGCTGCCTGCTCAGCCTGACCACGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGCAACCCCTCCAAGTGAAGAA
AAGGTACTTTCTAACCCTGACCTTCTAA
Protein sequenceShow/hide protein sequence
MAPLPGSFGGNVKVAKCGVCGLIGNPNDKCLDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTTA
ISKLEGKVKLPAQPDHANVSAISLRSGKILQPLQVKKRYFLTLTF