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PI0027340 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027340
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr10:2724410..2724814
RNA-Seq ExpressionPI0027340
SyntenyPI0027340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]3.4e-1449.51Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        GGVVLESFKQLE+GEI+ S N   S    +  K+++FT V RKKR LVS+RD+GK   +  + NSFGSLF +   + WAL +   +PPP Q    D G+ 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLS
        +LS
Subjt:  SLS

KAA0050228.1 hypothetical protein E6C27_scaffold355G00690 [Cucumis melo var. makuwa]1.1e-1548.46Show/hide
Query:  STGVEQAIVAYGGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPP
        S G + AIVAYG VVLESFKQ++EGE  GS N  ++    D G   DFT V   +R LVSVRD+G G+S     NS  SL  L   +N  L L  ++P P
Subjt:  STGVEQAIVAYGGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPP

Query:  LQTVGGDGGMPSLSPNGGPMGLIVDDSSHD
        LQ  G D  M + S NGGPMG  V    HD
Subjt:  LQTVGGDGGMPSLSPNGGPMGLIVDDSSHD

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.0e-1351Show/hide
Query:  VVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMPSL
        VVLESFKQLEEGEI+ S N   S    + GK+++FT V RKK  LVSVRD+GK   + A+ NSFGSL  +   + WAL +   +PPPLQ   G G +  L
Subjt:  VVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMPSL

TYK26642.1 uncharacterized protein E5676_scaffold313G002880 [Cucumis melo var. makuwa]9.1e-1546.22Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        G VVLESFKQLEEGEI+ S N   S    + GK ++FT V RKK  LVSV+D+GK ++   + NSFGSL  +   + WAL +   +PPPLQ   G+  + 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLSPNGGPMGLIVDDSSHD
          S   GP GL + ++ HD
Subjt:  SLSPNGGPMGLIVDDSSHD

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.4e-1547.06Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        G VVLESFKQLEE EI+ S N   S      GK ++FT V RKK  LVSVRD+GK   +  + NSFGSL  +   + WAL++   +PPPLQ   G   + 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLSPNGGPMGLIVDDSSHD
         +S + GP GL   ++SHD
Subjt:  SLSPNGGPMGLIVDDSSHD

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041006.8e-1647.06Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        G VVLESFKQLEE EI+ S N   S      GK ++FT V RKK  LVSVRD+GK   +  + NSFGSL  +   + WAL++   +PPPLQ   G   + 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLSPNGGPMGLIVDDSSHD
         +S + GP GL   ++SHD
Subjt:  SLSPNGGPMGLIVDDSSHD

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase1.7e-1449.51Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        GGVVLESFKQLE+GEI+ S N   S    +  K+++FT V RKKR LVS+RD+GK   +  + NSFGSLF +   + WAL +   +PPP Q    D G+ 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLS
        +LS
Subjt:  SLS

A0A5A7U4N3 DUF4283 domain-containing protein/zf-CCHC_4 domain-containing protein5.2e-1648.46Show/hide
Query:  STGVEQAIVAYGGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPP
        S G + AIVAYG VVLESFKQ++EGE  GS N  ++    D G   DFT V   +R LVSVRD+G G+S     NS  SL  L   +N  L L  ++P P
Subjt:  STGVEQAIVAYGGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPP

Query:  LQTVGGDGGMPSLSPNGGPMGLIVDDSSHD
        LQ  G D  M + S NGGPMG  V    HD
Subjt:  LQTVGGDGGMPSLSPNGGPMGLIVDDSSHD

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein4.9e-1451Show/hide
Query:  VVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMPSL
        VVLESFKQLEEGEI+ S N   S    + GK+++FT V RKK  LVSVRD+GK   + A+ NSFGSL  +   + WAL +   +PPPLQ   G G +  L
Subjt:  VVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMPSL

A0A5D3DT40 DUF4283 domain-containing protein4.4e-1546.22Show/hide
Query:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP
        G VVLESFKQLEEGEI+ S N   S    + GK ++FT V RKK  LVSV+D+GK ++   + NSFGSL  +   + WAL +   +PPPLQ   G+  + 
Subjt:  GGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGGDGGMP

Query:  SLSPNGGPMGLIVDDSSHD
          S   GP GL + ++ HD
Subjt:  SLSPNGGPMGLIVDDSSHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTCATAGTACGGGTGTTGAGCAGGCTATTGTGGCCTATGGGGGGGTGGTGTTAGAGTCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCTGAATTG
GCAGGTGTCTTCGACCATTAATGATAGGGGTAAGAAAGAGGATTTCACTCCTGTGATTCGTAAAAAGAGAGTTTTGGTTTCAGTGAGAGACAAAGGGAAAGGGAAGAGTA
TGCAGGCTTTGCAGAACTCTTTTGGTAGTCTTTTTTATTTGAGTAAAGGGGAAAATTGGGCGTTGGCCTTACGGGTTAGTACGCCTCCACCCTTACAGACTGTGGGCGGT
GATGGTGGCATGCCTAGTTTGAGTCCGAATGGTGGTCCTATGGGGCTAATTGTTGATGATAGTTCCCATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTTCATAGTACGGGTGTTGAGCAGGCTATTGTGGCCTATGGGGGGGTGGTGTTAGAGTCCTTTAAGCAGTTAGAGGAAGGTGAGATTCAGGGTTCTCTGAATTG
GCAGGTGTCTTCGACCATTAATGATAGGGGTAAGAAAGAGGATTTCACTCCTGTGATTCGTAAAAAGAGAGTTTTGGTTTCAGTGAGAGACAAAGGGAAAGGGAAGAGTA
TGCAGGCTTTGCAGAACTCTTTTGGTAGTCTTTTTTATTTGAGTAAAGGGGAAAATTGGGCGTTGGCCTTACGGGTTAGTACGCCTCCACCCTTACAGACTGTGGGCGGT
GATGGTGGCATGCCTAGTTTGAGTCCGAATGGTGGTCCTATGGGGCTAATTGTTGATGATAGTTCCCATGATTAG
Protein sequenceShow/hide protein sequence
MVVHSTGVEQAIVAYGGVVLESFKQLEEGEIQGSLNWQVSSTINDRGKKEDFTPVIRKKRVLVSVRDKGKGKSMQALQNSFGSLFYLSKGENWALALRVSTPPPLQTVGG
DGGMPSLSPNGGPMGLIVDDSSHD