CuGenDBv2

Gene ID	PI0027341
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Pol protein
Genome location	chr11:24121095..24121334
RNA-Seq Expression	PI0027341
Synteny	PI0027341
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR016197 - Chromo-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0043507.1 pol protein [Cucumis melo var. makuwa]

1.8e-31

87.18

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI LVKVLWRNHRIEEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

KAA0062529.1 pol protein [Cucumis melo var. makuwa]

1.8e-31

85.9

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

KAA0063117.1 pol protein [Cucumis melo var. makuwa]

1.8e-31

87.18

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI LVKVLWRNHRIEEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

KAA0067779.1 pol protein [Cucumis melo var. makuwa]

8.2e-32

87.18

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVERPVE+LA+EVKTLRN+EI LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

KAA0068212.1 pol protein [Cucumis melo var. makuwa]

1.4e-31

85.9

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI+LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UD58 Pol protein

8.8e-32

85.9

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVERPVE+LA+EVKTLRN++I LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

A0A5A7V803 Pol protein

8.8e-32

87.18

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI LVKVLWRNHRIEEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

A0A5A7VA30 Pol protein

8.8e-32

85.9

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

A0A5A7VIQ0 Pol protein

6.8e-32

85.9

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE+PVE+LA+EVKTLRN+EI+LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

A0A5A7VRK1 Pol protein

4.0e-32

87.18

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Query:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVERPVE+LA+EVKTLRN+EI LVKVLWRNHR+EEATWEREDD+R+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTGAGGAAATACGTGGCTGACCCATCTCATGTTTTGGATTATGAGCCCTTGGCGATTGATGAGAATTTGAGCTACGTAGAGCGTCCAGTTGAGATTTTGGCCAAGGA
AGTAAAGACGCTTCGTAACCGAGAAATTGCTTTAGTGAAGGTCCTTTGGCGCAATCACCGGATCGAAGAGGCCACGTGGGAGCGGGAGGATGACATAAGAGCTCGTTACC
CGGAGTTGTTCGAGAGTTAG

mRNA sequence

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Protein sequence

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MLRKYVADPSHVLDYEPLAIDENLSYVERPVEILAKEVKTLRNREIALVKVLWRNHRIEEATWEREDDIRARYPELFES

PI0027341 (gene) of Melon (PI 482460) v1 genome