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PI0027360 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027360
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr04:9609116..9610320
RNA-Seq ExpressionPI0027360
SyntenyPI0027360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053643.1 hypothetical protein E6C27_scaffold135G00140 [Cucumis melo var. makuwa]6.0e-2162.89Show/hide
Query:  CADEVEVANEDENVDYATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEEGV
        C DEVEVANEDENVDYATTRDQDNRKQE  ++                          N EA+PENYP DR CCGGAEDGYKENLIL+SEEEDEEGV
Subjt:  CADEVEVANEDENVDYATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEEGV

KGN59695.1 hypothetical protein Csa_002514 [Cucumis sativus]1.1e-2567.65Show/hide
Query:  MNTPCADEVEVANEDENVDYATTR-DQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEE
        MNTPCADEVEVANED NVDYATTR DQDNRKQEGNVD+DDPYDVEC+YCGALYAN                           +DGYKENLIL+SEEEDEE
Subjt:  MNTPCADEVEVANEDENVDYATTR-DQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEE

Query:  GV
        GV
Subjt:  GV

XP_022152195.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]5.0e-0743.12Show/hide
Query:  MNTPCADEVEV--ANEDENVDY----ATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRM-ENTEAHPENYPIDRPCCGGAEDGYKENLILDS
        MNTPC +EVEV    EDENV      AT + Q+  K++GNVD      VE K CGALY +H KRN+M E+ E + + +P       G  +  +E+L   S
Subjt:  MNTPCADEVEV--ANEDENVDY----ATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRM-ENTEAHPENYPIDRPCCGGAEDGYKENLILDS

Query:  EEEDEEGVD
        EEE E+  D
Subjt:  EEEDEEGVD

TrEMBL top hitse value%identityAlignment
A0A0A0LCF3 Uncharacterized protein5.2e-2667.65Show/hide
Query:  MNTPCADEVEVANEDENVDYATTR-DQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEE
        MNTPCADEVEVANED NVDYATTR DQDNRKQEGNVD+DDPYDVEC+YCGALYAN                           +DGYKENLIL+SEEEDEE
Subjt:  MNTPCADEVEVANEDENVDYATTR-DQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEE

Query:  GV
        GV
Subjt:  GV

A0A5A7UCL3 Uncharacterized protein2.9e-2162.89Show/hide
Query:  CADEVEVANEDENVDYATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEEGV
        C DEVEVANEDENVDYATTRDQDNRKQE  ++                          N EA+PENYP DR CCGGAEDGYKENLIL+SEEEDEEGV
Subjt:  CADEVEVANEDENVDYATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEEGV

A0A6J1DGW5 zinc finger BED domain-containing protein RICESLEEPER 2-like2.4e-0743.12Show/hide
Query:  MNTPCADEVEV--ANEDENVDY----ATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRM-ENTEAHPENYPIDRPCCGGAEDGYKENLILDS
        MNTPC +EVEV    EDENV      AT + Q+  K++GNVD      VE K CGALY +H KRN+M E+ E + + +P       G  +  +E+L   S
Subjt:  MNTPCADEVEV--ANEDENVDY----ATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRM-ENTEAHPENYPIDRPCCGGAEDGYKENLILDS

Query:  EEEDEEGVD
        EEE E+  D
Subjt:  EEEDEEGVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACTCCATGTGCAGACGAGGTTGAGGTTGCGAATGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATAT
TGATGATCCTTATGATGTTGAATGTAAATATTGTGGTGCTTTATATGCCAATCATTTAAAGAGAAATAGAATGGAAAATACGGAAGCACATCCCGAGAACTATCCTATTG
ATCGTCCTTGTTGCGGTGGGGCAGAAGATGGATATAAAGAGAATTTGATATTAGATAGTGAAGAGGAGGACGAGGAGGGTGTAGATTTTCAAACAATCTTAAAAGCAGCA
TCAACCAAGGAGGTGGGGACAATGTTTGGTGAAAATAAAGGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATACTCCATGTGCAGACGAGGTTGAGGTTGCGAATGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATAT
TGATGATCCTTATGATGTTGAATGTAAATATTGTGGTGCTTTATATGCCAATCATTTAAAGAGAAATAGAATGGAAAATACGGAAGCACATCCCGAGAACTATCCTATTG
ATCGTCCTTGTTGCGGTGGGGCAGAAGATGGATATAAAGAGAATTTGATATTAGATAGTGAAGAGGAGGACGAGGAGGGTGTAGATTTTCAAACAATCTTAAAAGCAGCA
TCAACCAAGGAGGTGGGGACAATGTTTGGTGAAAATAAAGGTGATTAG
Protein sequenceShow/hide protein sequence
MNTPCADEVEVANEDENVDYATTRDQDNRKQEGNVDIDDPYDVECKYCGALYANHLKRNRMENTEAHPENYPIDRPCCGGAEDGYKENLILDSEEEDEEGVDFQTILKAA
STKEVGTMFGENKGD