; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027389 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027389
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr03:10874299..10875110
RNA-Seq ExpressionPI0027389
SyntenyPI0027389
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.5e-3349.67Show/hide
Query:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL
        D N   P  D+V   A   P S PT++K   K+       ++T++GR+++PL++ SVPIDGISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M L
Subjt:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL

Query:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS
        I +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+HIRG  F+ S
Subjt:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS

KAA0042876.1 uncharacterized protein E6C27_scaffold44G003910 [Cucumis melo var. makuwa]2.6e-3337.36Show/hide
Query:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPS-----NSDHHQS
        MV+TR+G Y S   VP+               KS++  +  G+ +K+V T        ++   S   D++PL+RL+  +++  V + +      SD  Q 
Subjt:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPS-----NSDHHQS

Query:  SAS-------TPTLDENFTDP-----PPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDH
        S+S       TP    N  DP      P   ++P P  +  K +   + ++T+ GR+++PL++ SVPIDGISFH E +V +WK+V+QRRIA E ++SD H
Subjt:  SAS-------TPTLDENFTDP-----PPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDH

Query:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP
        HSC+++M LI + +L  T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  F FS+ P
Subjt:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP

TYK05279.1 uncharacterized protein E5676_scaffold108G00960 [Cucumis melo var. makuwa]1.5e-3336.69Show/hide
Query:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTP
        MV+TR+G Y S   VP+               KS++  +  G+ +K+V T        ++   S   D++PL+RL+  +++  V + + +++  +   TP
Subjt:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTP

Query:  TLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLT
        ++    T+P P          +  K +   + ++T+ GR+++PL++ SVPIDGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI + +L  
Subjt:  TLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLT

Query:  TVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP
        T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  F FS+ P
Subjt:  TVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP

XP_008454699.1 PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo]1.5e-3349.67Show/hide
Query:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL
        D N   P  D+V   A   P S PT++K   K+       ++T++GR+++PL++ SVPIDGISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M L
Subjt:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL

Query:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS
        I +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+HIRG  F+ S
Subjt:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS

XP_008463460.1 PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]7.4e-3336.76Show/hide
Query:  MVSTRRGYYSS-------QVPVPKKSVNPHVGSAVKNVRTNKHGVR-----------LRVTSSSSSQDNIPLSRLLNHLSSTAVPAPSN----SDHHQSS
        MV+TR+G Y+        + P PK +V+   G  V+  R      R             + ++S   D+IPL++LL  +++   P P N      H   +
Subjt:  MVSTRRGYYSS-------QVPVPKKSVNPHVGSAVKNVRTNKHGVR-----------LRVTSSSSSQDNIPLSRLLNHLSSTAVPAPSN----SDHHQSS

Query:  ASTPTLDENFTDP-PPDSVSDPAP-------------QSTPT-------KVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAA
           P  +E+  +P   D  +D  P             QS PT       KV+   + ++T++GR++VPL++ SVPIDGISFH E  V +WK+V+QRRI  
Subjt:  ASTPTLDENFTDP-PPDSVSDPAP-------------QSTPT-------KVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAA

Query:  ESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLI
        E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S I
Subjt:  ESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLI

TrEMBL top hitse value%identityAlignment
A0A1S3C0F4 uncharacterized protein LOC1034950537.2e-3449.67Show/hide
Query:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL
        D N   P  D+V   A   P S PT++K   K+       ++T++GR+++PL++ SVPIDGISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M L
Subjt:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL

Query:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS
        I +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+HIRG  F+ S
Subjt:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS

A0A5A7SJK4 Uncharacterized protein3.6e-3336.76Show/hide
Query:  MVSTRRGYYSS-------QVPVPKKSVNPHVGSAVKNVRTNKHGVR-----------LRVTSSSSSQDNIPLSRLLNHLSSTAVPAPSN----SDHHQSS
        MV+TR+G Y+        + P PK +V+   G  V+  R      R             + ++S   D+IPL++LL  +++   P P N      H   +
Subjt:  MVSTRRGYYSS-------QVPVPKKSVNPHVGSAVKNVRTNKHGVR-----------LRVTSSSSSQDNIPLSRLLNHLSSTAVPAPSN----SDHHQSS

Query:  ASTPTLDENFTDP-PPDSVSDPAP-------------QSTPT-------KVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAA
           P  +E+  +P   D  +D  P             QS PT       KV+   + ++T++GR++VPL++ SVPIDGISFH E  V +WK+V+QRRI  
Subjt:  ASTPTLDENFTDP-PPDSVSDPAP-------------QSTPT-------KVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAA

Query:  ESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLI
        E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S I
Subjt:  ESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLI

A0A5A7TLL0 Uncharacterized protein1.2e-3337.36Show/hide
Query:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPS-----NSDHHQS
        MV+TR+G Y S   VP+               KS++  +  G+ +K+V T        ++   S   D++PL+RL+  +++  V + +      SD  Q 
Subjt:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPS-----NSDHHQS

Query:  SAS-------TPTLDENFTDP-----PPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDH
        S+S       TP    N  DP      P   ++P P  +  K +   + ++T+ GR+++PL++ SVPIDGISFH E +V +WK+V+QRRIA E ++SD H
Subjt:  SAS-------TPTLDENFTDP-----PPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDH

Query:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP
        HSC+++M LI + +L  T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  F FS+ P
Subjt:  HSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP

A0A5D3B7L1 Gag-pol polyprotein7.2e-3449.67Show/hide
Query:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL
        D N   P  D+V   A   P S PT++K   K+       ++T++GR+++PL++ SVPIDGISFH E ++H+WK+V+QRRIA E ++SD HHSC+++M L
Subjt:  DENFTDPPPDSVSDPA---PQSTPTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTL

Query:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS
        I +A+L  T+S+V P+YP+LIRE  VN+PT+ ++PSSPDY T+HIRG  F+ S
Subjt:  ISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFS

A0A5D3C4H7 Uncharacterized protein7.2e-3436.69Show/hide
Query:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTP
        MV+TR+G Y S   VP+               KS++  +  G+ +K+V T        ++   S   D++PL+RL+  +++  V + + +++  +   TP
Subjt:  MVSTRRGYYSSQVPVPK---------------KSVNPHV--GSAVKNVRTNKHGVRLRVTSSSSSQ-DNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTP

Query:  TLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLT
        ++    T+P P          +  K +   + ++T+ GR+++PL++ SVPIDGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI + +L  
Subjt:  TLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLT

Query:  TVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP
        T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  F FS+ P
Subjt:  TVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSLIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACC
ATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCC
AAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATG
GAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGG
TCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGA
GGATTGCCCTTCTCCTTTTCCCTCATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACC
ATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCC
AAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATG
GAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGG
TCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGA
GGATTGCCCTTCTCCTTTTCCCTCATTCCTTGA
Protein sequenceShow/hide protein sequence
MVSTRRGYYSSQVPVPKKSVNPHVGSAVKNVRTNKHGVRLRVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDPAPQSTPTKVKS
KTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIR
GLPFSFSLIP