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PI0027393 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027393
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:10673339..10674651
RNA-Seq ExpressionPI0027393
SyntenyPI0027393
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.5e-6169.19Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  NPSSKE   P A L+KV S HA LK SE PLD S KQ +   +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEI TVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQL  TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER ++LSLE KEL+ RLQSIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        SCEK EAID++
Subjt:  SCEKNEAIDKR

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]1.2e-6069.19Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  +PSSKE   P A L+KV STHA LK SE PL  S KQ +   +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQL LTDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER ++LSLE KEL+ RLQSIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        S EK EAID++
Subjt:  SCEKNEAIDKR

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]4.6e-6373.06Show/hide
Query:  PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQANNLTPLEEYL
        P  PL+KV STHA LK SE PLD S + I    +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI KI  N LTPLEEYL
Subjt:  PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQANNLTPLEEYL

Query:  NSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSILSCEKNEAI
        NSYLK+VD+FNDVQ SYSAQLL TDK RQLDEKTSAI+EAL LM++L+EDA VIQERAMQLSLE KEL+ RLQS+N ESEQLSILSCEK EAI
Subjt:  NSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSILSCEKNEAI

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]2.3e-5967.92Show/hide
Query:  EKDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSG
        EKD+E  +P SKE   P A L+KV S HA LK SE PL  S K+     +PSQWVGEK              EDI+DKIMRT FEYIPRLRPEIATVLSG
Subjt:  EKDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSG

Query:  IAKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSI
        I KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQLL TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE KEL+ RLQSIN ESEQLSI
Subjt:  IAKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSI

Query:  LSCEKNEAIDKR
        LSCEK EAID++
Subjt:  LSCEKNEAIDKR

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]1.8e-5968.72Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  + SSKE   P A L KV STHA LK SE PL TS KQ +  S+PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQLL TDK RQL+EKTS IKEAL L+ QL+ D KVIQERA +LS E KEL+ RL SIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        SCEK EAID++
Subjt:  SCEKNEAIDKR

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein7.1e-6269.19Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  NPSSKE   P A L+KV S HA LK SE PLD S KQ +   +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEI TVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQL  TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER ++LSLE KEL+ RLQSIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        SCEK EAID++
Subjt:  SCEKNEAIDKR

A0A5A7U8X8 PMD domain-containing protein6.0e-6169.19Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  +PSSKE   P A L+KV STHA LK SE PL  S KQ +   +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQL LTDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER ++LSLE KEL+ RLQSIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        S EK EAID++
Subjt:  SCEKNEAIDKR

A0A5A7V3X5 PMD domain-containing protein2.2e-6373.06Show/hide
Query:  PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQANNLTPLEEYL
        P  PL+KV STHA LK SE PLD S + I    +PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI KI  N LTPLEEYL
Subjt:  PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQANNLTPLEEYL

Query:  NSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSILSCEKNEAI
        NSYLK+VD+FNDVQ SYSAQLL TDK RQLDEKTSAI+EAL LM++L+EDA VIQERAMQLSLE KEL+ RLQS+N ESEQLSILSCEK EAI
Subjt:  NSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSILSCEKNEAI

A0A5D3BW91 Uncharacterized protein1.1e-5967.92Show/hide
Query:  EKDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSG
        EKD+E  +P SKE   P A L+KV S HA LK SE PL  S K+     +PSQWVGEK              EDI+DKIMRT FEYIPRLRPEIATVLSG
Subjt:  EKDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSG

Query:  IAKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSI
        I KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQLL TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE KEL+ RLQSIN ESEQLSI
Subjt:  IAKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSI

Query:  LSCEKNEAIDKR
        LSCEK EAID++
Subjt:  LSCEKNEAIDKR

A0A5D3C3D7 PMD domain-containing protein8.7e-6068.72Show/hide
Query:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI
        KD+E  + SSKE   P A L KV STHA LK SE PL TS KQ +  S+PSQWVGEK              EDI+DKIMRTPFEYIPRLRPEIATVLSGI
Subjt:  KDVEKSNPSSKE---PTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEK--------------EDIRDKIMRTPFEYIPRLRPEIATVLSGI

Query:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL
         KI A+ LT LEEYLNSYLK+VD+FNDVQ SYSAQLL TDK RQL+EKTS IKEAL L+ QL+ D KVIQERA +LS E KEL+ RL SIN ESEQLSIL
Subjt:  AKIQANNLTPLEEYLNSYLKKVDSFNDVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSIL

Query:  SCEKNEAIDKR
        SCEK EAID++
Subjt:  SCEKNEAIDKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAGTGGTCAGGTCCATGATGGGCGAAAGAATAAAAGGCGAAGGGGTTCAGCTCGCCTTGGTGAGGGTGATTTGGAAGGAAGGGGAGAAGTAGATTTTGTGGG
CGGAGGGGTAGGCGGTCGTGGGGAAAGAAGAAGAGCGGGGAGGGTTGGAGCTGCTGGAATTTGGACTGATGGGGAGCTTGCTGTATTGGGTGGGGGGGTTGATGCAACGA
CTGGGATTTCCTTTTTCTTTCTGCTTGGGCCATTCCTTCAGGTGTGTCGCCTAATGTCTTTGCCCGTTGAAAAATCAAATCCACTGGGGAGACGCATAACCCACAACGTT
GAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCACAGCGCCTTTAGAGAAGGTCAAATCCACACATGCGTCTCTCAAGATTTCCGAGCCGCCTTTAGACAC
TTCGAGAAAGCAGATAGTAGGACCTTCTAAGCCCTCTCAGTGGGTTGGTGAAAAGGAGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTA
GGCCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATCCAAGCAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAAGGTAGACAGCTTCAAT
GATGTACAATTTTCATATTCCGCACAACTGCTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATGGACCAACTACA
GGAAGATGCCAAAGTTATTCAAGAGAGGGCTATGCAGTTATCCTTAGAAAATAAAGAACTGAAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAACTATCCATCT
TATCTTGTGAGAAAAATGAGGCCATAGATAAAAGGAATTGGAGATTGCTCAGCTCCAAGATGAAGCCAATGCTCTTGAAAGCACCTCTGCTATTACTGAAGAAGCCACTG
AGGCCTTGGCTACGGTTCGTAATAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAGTGGTCAGGTCCATGATGGGCGAAAGAATAAAAGGCGAAGGGGTTCAGCTCGCCTTGGTGAGGGTGATTTGGAAGGAAGGGGAGAAGTAGATTTTGTGGG
CGGAGGGGTAGGCGGTCGTGGGGAAAGAAGAAGAGCGGGGAGGGTTGGAGCTGCTGGAATTTGGACTGATGGGGAGCTTGCTGTATTGGGTGGGGGGGTTGATGCAACGA
CTGGGATTTCCTTTTTCTTTCTGCTTGGGCCATTCCTTCAGGTGTGTCGCCTAATGTCTTTGCCCGTTGAAAAATCAAATCCACTGGGGAGACGCATAACCCACAACGTT
GAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCACAGCGCCTTTAGAGAAGGTCAAATCCACACATGCGTCTCTCAAGATTTCCGAGCCGCCTTTAGACAC
TTCGAGAAAGCAGATAGTAGGACCTTCTAAGCCCTCTCAGTGGGTTGGTGAAAAGGAGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTA
GGCCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATCCAAGCAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAAGGTAGACAGCTTCAAT
GATGTACAATTTTCATATTCCGCACAACTGCTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATGGACCAACTACA
GGAAGATGCCAAAGTTATTCAAGAGAGGGCTATGCAGTTATCCTTAGAAAATAAAGAACTGAAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAACTATCCATCT
TATCTTGTGAGAAAAATGAGGCCATAGATAAAAGGAATTGGAGATTGCTCAGCTCCAAGATGAAGCCAATGCTCTTGAAAGCACCTCTGCTATTACTGAAGAAGCCACTG
AGGCCTTGGCTACGGTTCGTAATAGTATGA
Protein sequenceShow/hide protein sequence
MAKSGQVHDGRKNKRRRGSARLGEGDLEGRGEVDFVGGGVGGRGERRRAGRVGAAGIWTDGELAVLGGGVDATTGISFFFLLGPFLQVCRLMSLPVEKSNPLGRRITHNV
EKDVEKSNPSSKEPTAPLEKVKSTHASLKISEPPLDTSRKQIVGPSKPSQWVGEKEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQANNLTPLEEYLNSYLKKVDSFN
DVQFSYSAQLLLTDKTRQLDEKTSAIKEALALMDQLQEDAKVIQERAMQLSLENKELKSRLQSINTESEQLSILSCEKNEAIDKRNWRLLSSKMKPMLLKAPLLLLKKPL
RPWLRFVIV