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PI0027399 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027399
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:25353340..25355862
RNA-Seq ExpressionPI0027399
SyntenyPI0027399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035461.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.8e-2833.58Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKG-------------------------------------RSHPSFRCRDNNRSTNSNSP----
        MKVTTIEEAND+ T+KLDELF SL+T EL   +   +K                                       S   +R +D+ RS     P    
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKG-------------------------------------RSHPSFRCRDNNRSTNSNSP----

Query:  RINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVL
        + ++     ECEGF H Q +C+++LK +KKS++ T S+++    SD EE G AL   +       E+V    IDQ             L  KW+E Q ++
Subjt:  RINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVL

Query:  KQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
          Q++WIQ ++E+N   LS + T K +LK  R  FE L+  ++ML + TQ L  ++  GK   DK+G+GFS+ G
Subjt:  KQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

KAA0043382.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-2837.34Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKGRSHPSFRCRDNNRSTNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKP
        MKVTTIEE ND+  +KLDELF SL+T EL  ++  ++  + + + +   N++    +           ECEGF H Q EC+++LK +KKS++ TLSD++ 
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKGRSHPSFRCRDNNRSTNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKP

Query:  TVDSDYEEHGGALFDCVA--EDVTPDNIDQ-----------------LHMKWEEHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNY
         ++SD EE G AL   +   E+   + I Q                 L  KWEE Q  +  Q++ IQ ++E+N   LS + T K +LK  R  FE LS  
Subjt:  TVDSDYEEHGGALFDCVA--EDVTPDNIDQ-----------------LHMKWEEHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNY

Query:  VRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
        V+M+   T  LD +L  GK   DK+G+GFS+ G
Subjt:  VRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

KAA0051793.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.7e-2843.18Show/hide
Query:  TNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAEDVTPDN-------------------IDQLHMKWE
        ++S S + +RSF+  ECEGF HYQ EC +FLK + KS+ VTLSD++ + DSD E  G  L  CV E+ +  +                    D+L  KWE
Subjt:  TNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAEDVTPDN-------------------IDQLHMKWE

Query:  EHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGF
        E Q V K QK+ IQ +LEDNH L+SM+   K+ LK V+ +F++LS  VR+L   TQ LD +L  GKI+ +KK +G+
Subjt:  EHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGF

KAA0053130.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.9e-3240.82Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK--GRSHPSFRCRDNN---------------RSTNSNSPRINRSFEGRECEGFEHYQVECSSF
        MKVTT +EAND+  +KLDELF SL+T EL   +   KK  G +  S     NN                S  S + R +RS    E +GFEHYQ EC++F
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK--GRSHPSFRCRDNN---------------RSTNSNSPRINRSFEGRECEGFEHYQVECSSF

Query:  LKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAED--------------------------VTPDNIDQLHMKWEEHQIVLKQQKDWIQVMLEDNHRL
        LK ++K +IVTLSDD+ T DS+ E+ G AL   + E+                          +T    D L  KWE++QIVLKQQK+ IQ ++E+NH L
Subjt:  LKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAED--------------------------VTPDNIDQLHMKWEEHQIVLKQQKDWIQVMLEDNHRL

Query:  LSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIR
        +S ++  K++LK  R +FE LS +V+ML S T+ LD+IL  GK R
Subjt:  LSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIR

XP_016902771.1 PREDICTED: uncharacterized protein LOC107991877 [Cucumis melo]2.3e-2834.72Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK-------------GRSH---------------PSFRCRDNNRSTNSNSP----RINRSFEGR
        MKVTTIEEAND+ T+KLDELF SL+T EL   +   +K                H                 +R +D+ RS     P    + ++     
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK-------------GRSH---------------PSFRCRDNNRSTNSNSP----RINRSFEGR

Query:  ECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVLKQQKDWIQV
        ECEGF H Q +C+++LK +KKS++ T S+++    SD EE G AL   +       E+V    IDQ             L  KW+E Q ++  Q++WIQ 
Subjt:  ECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVLKQQKDWIQV

Query:  MLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
        ++E+N   LS + T K +LK  R  FE L+  ++ML + TQ L  ++  GK   DK+G+GFS+ G
Subjt:  MLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

TrEMBL top hitse value%identityAlignment
A0A1S4E3G5 uncharacterized protein LOC1079918771.1e-2834.72Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK-------------GRSH---------------PSFRCRDNNRSTNSNSP----RINRSFEGR
        MKVTTIEEAND+ T+KLDELF SL+T EL   +   +K                H                 +R +D+ RS     P    + ++     
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK-------------GRSH---------------PSFRCRDNNRSTNSNSP----RINRSFEGR

Query:  ECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVLKQQKDWIQV
        ECEGF H Q +C+++LK +KKS++ T S+++    SD EE G AL   +       E+V    IDQ             L  KW+E Q ++  Q++WIQ 
Subjt:  ECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVLKQQKDWIQV

Query:  MLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
        ++E+N   LS + T K +LK  R  FE L+  ++ML + TQ L  ++  GK   DK+G+GFS+ G
Subjt:  MLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

A0A5A7T1K8 Gag-pol polyprotein4.3e-2833.58Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKG-------------------------------------RSHPSFRCRDNNRSTNSNSP----
        MKVTTIEEAND+ T+KLDELF SL+T EL   +   +K                                       S   +R +D+ RS     P    
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKG-------------------------------------RSHPSFRCRDNNRSTNSNSP----

Query:  RINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVL
        + ++     ECEGF H Q +C+++LK +KKS++ T S+++    SD EE G AL   +       E+V    IDQ             L  KW+E Q ++
Subjt:  RINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCV------AEDVTPDNIDQ-------------LHMKWEEHQIVL

Query:  KQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
          Q++WIQ ++E+N   LS + T K +LK  R  FE L+  ++ML + TQ L  ++  GK   DK+G+GFS+ G
Subjt:  KQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

A0A5A7TJC1 Gag-pol polyprotein8.6e-2937.34Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKGRSHPSFRCRDNNRSTNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKP
        MKVTTIEE ND+  +KLDELF SL+T EL  ++  ++  + + + +   N++    +           ECEGF H Q EC+++LK +KKS++ TLSD++ 
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKGRSHPSFRCRDNNRSTNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKP

Query:  TVDSDYEEHGGALFDCVA--EDVTPDNIDQ-----------------LHMKWEEHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNY
         ++SD EE G AL   +   E+   + I Q                 L  KWEE Q  +  Q++ IQ ++E+N   LS + T K +LK  R  FE LS  
Subjt:  TVDSDYEEHGGALFDCVA--EDVTPDNIDQ-----------------LHMKWEEHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNY

Query:  VRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG
        V+M+   T  LD +L  GK   DK+G+GFS+ G
Subjt:  VRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNG

A0A5A7UD40 Gag-pol polyprotein2.8e-3240.82Show/hide
Query:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK--GRSHPSFRCRDNN---------------RSTNSNSPRINRSFEGRECEGFEHYQVECSSF
        MKVTT +EAND+  +KLDELF SL+T EL   +   KK  G +  S     NN                S  S + R +RS    E +GFEHYQ EC++F
Subjt:  MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKK--GRSHPSFRCRDNN---------------RSTNSNSPRINRSFEGRECEGFEHYQVECSSF

Query:  LKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAED--------------------------VTPDNIDQLHMKWEEHQIVLKQQKDWIQVMLEDNHRL
        LK ++K +IVTLSDD+ T DS+ E+ G AL   + E+                          +T    D L  KWE++QIVLKQQK+ IQ ++E+NH L
Subjt:  LKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAED--------------------------VTPDNIDQLHMKWEEHQIVLKQQKDWIQVMLEDNHRL

Query:  LSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIR
        +S ++  K++LK  R +FE LS +V+ML S T+ LD+IL  GK R
Subjt:  LSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIR

A0A5D3DD57 Gag-pol polyprotein3.3e-2843.18Show/hide
Query:  TNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAEDVTPDN-------------------IDQLHMKWE
        ++S S + +RSF+  ECEGF HYQ EC +FLK + KS+ VTLSD++ + DSD E  G  L  CV E+ +  +                    D+L  KWE
Subjt:  TNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHGGALFDCVAEDVTPDN-------------------IDQLHMKWE

Query:  EHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGF
        E Q V K QK+ IQ +LEDNH L+SM+   K+ LK V+ +F++LS  VR+L   TQ LD +L  GKI+ +KK +G+
Subjt:  EHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTACGACCATTGAAGAAGCAAATGACATTGATACATTGAAGTTGGATGAGTTGTTTGCGTCATTACAAACGTCTGAGCTCACTTTTGATGATCAGGGTGACAA
GAAAGGTAGGTCTCATCCTTCATTTAGATGTAGGGATAATAACAGAAGCACTAACAGTAATTCTCCTAGAATTAACAGAAGTTTTGAAGGTCGGGAGTGTGAAGGTTTTG
AGCACTATCAAGTAGAGTGTTCGAGTTTTTTGAAAGGGGAGAAGAAAAGTATGATTGTTACTCTATCAGATGATAAGCCAACTGTCGACAGCGACTATGAGGAACATGGT
GGAGCCTTGTTTGATTGCGTTGCAGAGGATGTAACTCCAGATAATATTGACCAATTGCACATGAAATGGGAAGAGCATCAGATAGTGTTGAAACAACAGAAGGATTGGAT
TCAGGTCATGTTGGAAGATAATCATCGTCTGCTATCCATGTTATCCACTTTCAAACTTAAGTTGAAAGCTGTTCGTATGGATTTTGAAACCCTATCCAATTATGTCAGGA
TGCTTAATTCTAGCACGCAAGGCTTGGACACTATTTTGAAAGTTGGCAAGATCAGGATGGATAAAAAAGGTATAGGATTTTCTGATAACGGTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTACGACCATTGAAGAAGCAAATGACATTGATACATTGAAGTTGGATGAGTTGTTTGCGTCATTACAAACGTCTGAGCTCACTTTTGATGATCAGGGTGACAA
GAAAGGTAGGTCTCATCCTTCATTTAGATGTAGGGATAATAACAGAAGCACTAACAGTAATTCTCCTAGAATTAACAGAAGTTTTGAAGGTCGGGAGTGTGAAGGTTTTG
AGCACTATCAAGTAGAGTGTTCGAGTTTTTTGAAAGGGGAGAAGAAAAGTATGATTGTTACTCTATCAGATGATAAGCCAACTGTCGACAGCGACTATGAGGAACATGGT
GGAGCCTTGTTTGATTGCGTTGCAGAGGATGTAACTCCAGATAATATTGACCAATTGCACATGAAATGGGAAGAGCATCAGATAGTGTTGAAACAACAGAAGGATTGGAT
TCAGGTCATGTTGGAAGATAATCATCGTCTGCTATCCATGTTATCCACTTTCAAACTTAAGTTGAAAGCTGTTCGTATGGATTTTGAAACCCTATCCAATTATGTCAGGA
TGCTTAATTCTAGCACGCAAGGCTTGGACACTATTTTGAAAGTTGGCAAGATCAGGATGGATAAAAAAGGTATAGGATTTTCTGATAACGGTCAATAG
Protein sequenceShow/hide protein sequence
MKVTTIEEANDIDTLKLDELFASLQTSELTFDDQGDKKGRSHPSFRCRDNNRSTNSNSPRINRSFEGRECEGFEHYQVECSSFLKGEKKSMIVTLSDDKPTVDSDYEEHG
GALFDCVAEDVTPDNIDQLHMKWEEHQIVLKQQKDWIQVMLEDNHRLLSMLSTFKLKLKAVRMDFETLSNYVRMLNSSTQGLDTILKVGKIRMDKKGIGFSDNGQ