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PI0027407 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027407
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAP2/ERF domain-containing transcription factor
Genome locationchr06:103586..104058
RNA-Seq ExpressionPI0027407
SyntenyPI0027407
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048804.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa]2.8e-6287.58Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        SSSSLEGSSSDLFLLEQIR+HLLEDDLGKGSTNNNVEDGIIRYDIS SGAGWEMS NNNNNNMVDQMSSIIIRDNPEE S  RPRGLQFRGVRRRPWG+ 
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
                   ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

KAE8650208.1 hypothetical protein Csa_010866 [Cucumis sativus]2.6e-4468.39Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDG                               IIRDNPEE S+PRPRGLQFRGVRRRPWG+ 
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
                   ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

KAG6597005.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2249.04Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRR
        S  S   SSS++FLLE IR+HLLED+      LGK + +    DG+   DI + G G                SSI              RGLQFRGVRR
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRR

Query:  RPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RPWG+            ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

XP_004134277.2 ethylene-responsive transcription factor 1 [Cucumis sativus]8.7e-6486.45Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS  NNNNNMVDQMSSIIIRDNPEE S+PRPRGLQFRGVRRRPWG+ 
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
                   ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]4.9e-2249.03Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRP
        S+ S   SSS++FLLE IR+HLLED+L    G G    +++ G    DI + G G                SSI              RGLQFRGVRRRP
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRP

Query:  WGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        WG+            ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  WGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein4.2e-6486.45Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        SSSSLEGSSSDLF LEQIR+HLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMS  NNNNNMVDQMSSIIIRDNPEE S+PRPRGLQFRGVRRRPWG+ 
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
                   ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 131.4e-6287.58Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        SSSSLEGSSSDLFLLEQIR+HLLEDDLGKGSTNNNVEDGIIRYDIS SGAGWEMS NNNNNNMVDQMSSIIIRDNPEE S  RPRGLQFRGVRRRPWG+ 
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
                   ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

A0A6J1GF81 ethylene-responsive transcription factor 1-like4.0e-2249.04Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRR
        S+ S   SSS++FLLE IR+HLLED+      LGK + +    DG+   DI + G G                SSI              RGLQFRGVRR
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDD------LGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRR

Query:  RPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        RPWG+            ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

A0A6J1IH30 ethylene-responsive transcription factor 13-like2.4e-2249.03Show/hide
Query:  SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRP
        S+ S   SSS++FLLE IR+HLLED+L    G G    +++ G    DI + G G                SSI              RGLQFRGVRRRP
Subjt:  SSSSLEGSSSDLFLLEQIRQHLLEDDL----GKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRP

Query:  WGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS
        WG+            ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  WGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS

M5WET5 AP2/ERF domain-containing protein7.1e-1945.1Show/hide
Query:  SSSDLFLLEQIRQHLLEDDLGKGST--NNNVEDGIIRYDI-----SSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-
        +SS+  LLE IRQHLL+DD    +T   +  ED    YD      SSS A + +    +   ++D    + ++     N  P P G  FRGVRRRPWG+ 
Subjt:  SSSDLFLLEQIRQHLLEDDLGKGST--NNNVEDGIIRYDI-----SSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-

Query:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
                   AR+WLGTY TA+DA LAYDRAAF+MRG+KAKLNFPH+I S++
Subjt:  -----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

SwissProt top hitse value%identityAlignment
Q40476 Ethylene-responsive transcription factor 17.8e-1543.81Show/hide
Query:  GWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPR---PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        GW   N +      +Q    I+    E  + P    PRG  +RGVRRRPWG+            AR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH
Subjt:  GWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPR---PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

Query:  IISSN
         I  N
Subjt:  IISSN

Q40479 Ethylene-responsive transcription factor 23.5e-1556.52Show/hide
Query:  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWG+            AR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q84XB3 Ethylene-responsive transcription factor 13.9e-1454.29Show/hide
Query:  RPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        +P+G  +RGVR+RPWG+            AR+WLGTY +A++AALAY +AAF+MRG KA LNFPH I  N
Subjt:  RPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Q8L9K1 Ethylene-responsive transcription factor 133.1e-1961.64Show/hide
Query:  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY
        PR +G+Q+RGVRRRPWG+            AR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S  Y
Subjt:  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY

Q9LW50 Ethylene-responsive transcription factor 23.5e-1556.52Show/hide
Query:  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        P+G  +RGVR+RPWG+            AR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I  N
Subjt:  PRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein1.8e-1445.45Show/hide
Query:  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        E++     +++ DQ SS+ +++  + NSR R     +RGVR+RPWG+           AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G33710.2 Integrase-type DNA-binding superfamily protein1.8e-1445.45Show/hide
Query:  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN
        E++     +++ DQ SS+ +++  + NSR R     +RGVR+RPWG+           AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I  N
Subjt:  EMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN

AT2G44840.1 ethylene-responsive element binding factor 132.2e-2061.64Show/hide
Query:  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY
        PR +G+Q+RGVRRRPWG+            AR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S  Y
Subjt:  PRPRGLQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY

AT3G23220.1 Integrase-type DNA-binding superfamily protein6.8e-1457.38Show/hide
Query:  LQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        +++RGVR+RPWG+            AR+WLGT++TA+DAA AYDRAAF MRG +A LNFPH
Subjt:  LQFRGVRRRPWGR------------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

AT5G13330.1 related to AP2 6l2.0e-1347.95Show/hide
Query:  RDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP
        + +  +  + +PR   +RGVR+RPWG+           AR+WLGT+ TA++AALAYDRAA + +G KAKLNFP
Subjt:  RDNPEENSRPRPRGLQFRGVRRRPWGR-----------ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGTAGCAGCAGCTTGGAAGGGTCATCGTCGGATTTATTTCTTCTGGAGCAGATTCGGCAGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACGAATAATAA
TGTTGAGGATGGAATAATTAGGTATGATATTAGCAGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATAATATGGTGGATCAAATGTCGTCAATTATTA
TTAGAGACAATCCGGAGGAGAATTCTCGGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGAAGAGCTCGAATATGGCTGGGGACTTACCAC
ACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGTGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGTAGCAGCAGCTTGGAAGGGTCATCGTCGGATTTATTTCTTCTGGAGCAGATTCGGCAGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACGAATAATAA
TGTTGAGGATGGAATAATTAGGTATGATATTAGCAGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATAATATGGTGGATCAAATGTCGTCAATTATTA
TTAGAGACAATCCGGAGGAGAATTCTCGGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGAAGAGCTCGAATATGGCTGGGGACTTACCAC
ACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGTGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA
Protein sequenceShow/hide protein sequence
MLSSSSLEGSSSDLFLLEQIRQHLLEDDLGKGSTNNNVEDGIIRYDISSSGAGWEMSNNNNNNNMVDQMSSIIIRDNPEENSRPRPRGLQFRGVRRRPWGRARIWLGTYH
TAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS