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PI0027438 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027438
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box/kelch-repeat protein
Genome locationchr03:5802640..5805167
RNA-Seq ExpressionPI0027438
SyntenyPI0027438
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064737.1 F-box/kelch-repeat protein [Cucumis melo var. makuwa]3.3e-3394.74Show/hide
Query:  GILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        GILTMHRGRDNP KLQNITHTAISSK KREFGMDFESDWTRHVKSSAFAAP+IRSATSFMRWSCRIPISEGY EFL
Subjt:  GILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

KAE8647234.1 hypothetical protein Csa_019002, partial [Cucumis sativus]2.1e-4896.94Show/hide
Query:  FSFPFFIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        FSFPFFIWKLWGANLASSMALTGILTMHRGRD+PIKLQNITHTA SSKHKREFGMDFESDWTRHVKSSAFAAP+IRSATSFMRWSCRIPISEGYHEFL
Subjt:  FSFPFFIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

KAG2702702.1 hypothetical protein I3760_06G102300 [Carya illinoinensis]7.4e-1760.98Show/hide
Query:  MALTGILTMHRGRDNPIKLQNITHTAISSKH--KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        MAL+ I  M  GR+N + L++I H      H   +  GM+FESDWTRH KSSAF A +IRSATSFM WSCRIPI EGYHEFL
Subjt:  MALTGILTMHRGRDNPIKLQNITHTAISSKH--KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

KAG6585216.1 hypothetical protein SDJN03_17949, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3584.04Show/hide
Query:  FIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREF-GMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        F WK WGANLASSMALTGIL MHR R N IKLQ+ITHTAISSK+ REF GMDFESDWTRH KSSAFAA +IRSATSFM WSCRIPIS+GYHEFL
Subjt:  FIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREF-GMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

KAG7020136.1 hypothetical protein SDJN02_16818 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3584.04Show/hide
Query:  FIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREF-GMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        F WK WGANLASSMALTGIL MHR R N IKLQ+ITHTAISSK+ REF GMDFESDWTRH KSSAFAA +IRSATSFM WSCRIPIS+GYHEFL
Subjt:  FIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREF-GMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KD56 Uncharacterized protein4.6e-4994.06Show/hide
Query:  LKIFSFPFFIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEF
        ++ FSFPFFIWKLWGANLASSMALTGILTMHRGRD+PIKLQNITHTA SSKHKREFGMDFESDWTRHVKSSAFAAP+IRSATSFMRWSCRIPISEGYHEF
Subjt:  LKIFSFPFFIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEF

Query:  L
        L
Subjt:  L

A0A444WZZ5 Uncharacterized protein1.8e-1354.02Show/hide
Query:  LASSMALTGILTMHRGRDNPIKLQNITHTAIS-SKH--KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        L SSMA T +  M +G      L+N + T I+ S H   R   M+FESDWT+H KSSA+ A +IRSATS + WSCR+PI EGYHEFL
Subjt:  LASSMALTGILTMHRGRDNPIKLQNITHTAIS-SKH--KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

A0A5A7VCL2 F-box/kelch-repeat protein1.6e-3394.74Show/hide
Query:  GILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        GILTMHRGRDNP KLQNITHTAISSK KREFGMDFESDWTRHVKSSAFAAP+IRSATSFMRWSCRIPISEGY EFL
Subjt:  GILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

A0A5J5ASN4 Uncharacterized protein1.4e-1659.09Show/hide
Query:  LASSMALTGILTMHRGRDNPIKLQ-NITHTAISSKH---KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        ++S MAL     M  GR+N  KL+ +IT    + K+    R  GMDFESDWT+H KSSAF A +IRSATSFM WSC+IPISEGYHEFL
Subjt:  LASSMALTGILTMHRGRDNPIKLQ-NITHTAISSKH---KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

A0A5J5AWB6 Uncharacterized protein6.7e-1657.95Show/hide
Query:  LASSMALTGILTMHRGRDNPIKLQ-NITHTAISSKH---KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL
        ++SSMAL     M  GR+N  KL+ +IT    + K+    R   MDFESDWT+H KSSAF A +IRSATSFM WSC+IPI EGYHEFL
Subjt:  LASSMALTGILTMHRGRDNPIKLQ-NITHTAISSKH---KREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAAGATTTTTAGTTTCCCTTTTTTCATATGGAAGTTATGGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAA
CCCTATAAAGTTGCAGAACATCACTCATACAGCAATATCTAGTAAACATAAACGTGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCAT
TTGCTGCTCCAATGATCCGTTCTGCAACTTCGTTTATGCGCTGGTCTTGCAGAATCCCAATTAGTGAAGGATATCACGAATTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAAGATTTTTAGTTTCCCTTTTTTCATATGGAAGTTATGGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAA
CCCTATAAAGTTGCAGAACATCACTCATACAGCAATATCTAGTAAACATAAACGTGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCAT
TTGCTGCTCCAATGATCCGTTCTGCAACTTCGTTTATGCGCTGGTCTTGCAGAATCCCAATTAGTGAAGGATATCACGAATTTCTTTAA
Protein sequenceShow/hide protein sequence
MLKIFSFPFFIWKLWGANLASSMALTGILTMHRGRDNPIKLQNITHTAISSKHKREFGMDFESDWTRHVKSSAFAAPMIRSATSFMRWSCRIPISEGYHEFL