; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027445 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027445
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:2946139..2946732
RNA-Seq ExpressionPI0027445
SyntenyPI0027445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]1.4e-0831.19Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVK---NKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIKL
        +C  E     +    KRKVSF SP+N+ + F   SAP + LK+ SP   +  E + K+      K VY  K ++ +      +     E+I+  E   +L
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVK---NKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIKL

Query:  VVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPNDM
        VVDLG ++P+ + D + P  P    + TS   +    DS   M+T   ED      +N   + +E++  FK++L +WLKENNL+LA+   ++  ++ ND 
Subjt:  VVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPNDM

Query:  MN
        M+
Subjt:  MN

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]2.2e-0934.03Show/hide
Query:  EQPPSSATFQQKRKVSFPSPRNKIYFFDPESAPRPL-KIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIK--------
        E   S+   + KRKVSF SP++K   +DP+SAP+ L K++SP  +SP++K  KK + ++    K K    +K   T   +  E + K  G+K        
Subjt:  EQPPSSATFQQKRKVSFPSPRNKIYFFDPESAPRPL-KIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIK--------

Query:  ------LVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQE---DQNNASDVQEDKPFKQQLIEWLKENNLKLASI
              L VDLGP++P  +   +SP     SQ+ TS  ++    DS   ++ S+ E   ++    +  E++ FK++LIEWLK NNLKLA +
Subjt:  ------LVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQE---DQNNASDVQEDKPFKQQLIEWLKENNLKLASI

KAA0063658.1 hypothetical protein E6C27_scaffold329G001730 [Cucumis melo var. makuwa]2.0e-1031.63Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------
        +C  + PP   +   KRKVSF  P+N+ + +  ++AP + LKI SP   +   K C++ K K     K+K    VK  +TE  +S+     EKG      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------

Query:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQN------NASDVQEDK-PFKQQLIEWLKENNLKLASI---TINET-
        + LV+DLG ++P+ ++D +SP     + + T+   +    DS   MITSD E++          +  +D+  FK++L +WLKENNL+L+++     N T 
Subjt:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQN------NASDVQEDK-PFKQQLIEWLKENNLKLASI---TINET-

Query:  ----TAIPNDMMNPD
             ++PN   N D
Subjt:  ----TAIPNDMMNPD

TYJ99327.1 hypothetical protein E5676_scaffold248G005420 [Cucumis melo var. makuwa]4.9e-0931.03Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------
        +C  E  P  +    KRKVSF SP+N+ + F   SAP + LK+ SP   +  E + K+    +    K++ ++ VK    E  +S+    K+KG      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------

Query:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNN------ASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIP
         +LVVDLG ++P+ + D + P  P  + + TS   +    D+   M+T   ED+          + ++D+  FK +L +WLKENNL+LA+   ++  ++ 
Subjt:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNN------ASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIP

Query:  NDM
        NDM
Subjt:  NDM

TYK11997.1 hypothetical protein E5676_scaffold1017G00010 [Cucumis melo var. makuwa]2.1e-1231.55Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------
        +C D+ PP       KRKVSF SP+N+ + +  +SAP + L I SP   +   K+C++ K K +   K+K    VK  +TE  +S+     EKG      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------

Query:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNNAS-DVQEDK------PFKQQLIEWLKENNLKLASITINETTAIP
        +K VVDLG ++P+++ D +SP     + + T+   +    D+   MI SD E++     +++ D+       FK++L +WLKENNL+L+++  +   +  
Subjt:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNNAS-DVQEDK------PFKQQLIEWLKENNLKLASITINETTAIP

Query:  NDMMNP
         D++ P
Subjt:  NDMMNP

TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein1.1e-0934.03Show/hide
Query:  EQPPSSATFQQKRKVSFPSPRNKIYFFDPESAPRPL-KIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIK--------
        E   S+   + KRKVSF SP++K   +DP+SAP+ L K++SP  +SP++K  KK + ++    K K    +K   T   +  E + K  G+K        
Subjt:  EQPPSSATFQQKRKVSFPSPRNKIYFFDPESAPRPL-KIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIK--------

Query:  ------LVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQE---DQNNASDVQEDKPFKQQLIEWLKENNLKLASI
              L VDLGP++P  +   +SP     SQ+ TS  ++    DS   ++ S+ E   ++    +  E++ FK++LIEWLK NNLKLA +
Subjt:  ------LVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQE---DQNNASDVQEDKPFKQQLIEWLKENNLKLASI

A0A5D3BJM1 Uncharacterized protein2.4e-0931.03Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------
        +C  E  P  +    KRKVSF SP+N+ + F   SAP + LK+ SP   +  E + K+    +    K++ ++ VK    E  +S+    K+KG      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------

Query:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNN------ASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIP
         +LVVDLG ++P+ + D + P  P  + + TS   +    D+   M+T   ED+          + ++D+  FK +L +WLKENNL+LA+   ++  ++ 
Subjt:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNN------ASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIP

Query:  NDM
        NDM
Subjt:  NDM

A0A5D3CJ66 Uncharacterized protein1.0e-1231.55Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------
        +C D+ PP       KRKVSF SP+N+ + +  +SAP + L I SP   +   K+C++ K K +   K+K    VK  +TE  +S+     EKG      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKG------

Query:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNNAS-DVQEDK------PFKQQLIEWLKENNLKLASITINETTAIP
        +K VVDLG ++P+++ D +SP     + + T+   +    D+   MI SD E++     +++ D+       FK++L +WLKENNL+L+++  +   +  
Subjt:  IKLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQEDQNNAS-DVQEDK------PFKQQLIEWLKENNLKLASITINETTAIP

Query:  NDMMNP
         D++ P
Subjt:  NDMMNP

A0A5D3DDN2 Uncharacterized protein1.2e-0831.03Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQI-VKVTETEATSSEEIENKEK----GI
        +C  E     +    KRKVSF SP+N+ + F   SAP + LK+ SP   +  E + K+    +    K+K +++  +  E E + +   ++KEK      
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQI-VKVTETEATSSEEIENKEK----GI

Query:  KLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPN
        +LVVDLG ++P+ + D + P  P    + TS   +    DS   M+T   ED      +N   + ++D+  FK++L +WLKENNL+LA+   ++  ++ N
Subjt:  KLVVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPN

Query:  DMM
        D M
Subjt:  DMM

A0A5D3DLT1 DUF4283 domain-containing protein6.9e-0931.19Show/hide
Query:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVK---NKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIKL
        +C  E     +    KRKVSF SP+N+ + F   SAP + LK+ SP   +  E + K+      K VY  K ++ +      +     E+I+  E   +L
Subjt:  VCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAP-RPLKIRSPTKKSPREKQCKKVK---NKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIKL

Query:  VVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPNDM
        VVDLG ++P+ + D + P  P    + TS   +    DS   M+T   ED      +N   + +E++  FK++L +WLKENNL+LA+   ++  ++ ND 
Subjt:  VVDLGPMTPIVNLDNTSPAYPMNSQNATSLYNN--TTDSGGPMITSDQED------QNNASDVQEDK-PFKQQLIEWLKENNLKLASITINETTAIPNDM

Query:  MN
        M+
Subjt:  MN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGATGATGAACAGCCACCTAGCTCTGCTACTTTTCAACAAAAAAGAAAAGTCTCATTTCCTTCTCCAAGGAATAAAATATACTTCTTTGATCCTGAAAGTGC
CCCAAGACCTCTGAAAATTAGAAGCCCAACAAAGAAAAGCCCAAGGGAAAAGCAATGCAAGAAAGTGAAGAACAAAATGGTTTATATTCAGAAACAGAAGGCCCACCAGA
TTGTCAAAGTAACAGAAACTGAAGCAACCTCTTCGGAAGAAATAGAGAACAAAGAAAAGGGGATAAAGCTAGTTGTTGACTTGGGGCCCATGACACCCATAGTCAACTTA
GATAACACAAGCCCAGCTTATCCTATGAACTCACAAAATGCTACTTCTCTATACAACAATACAACAGACAGTGGAGGGCCAATGATCACAAGCGACCAAGAAGACCAAAA
CAATGCAAGTGATGTGCAAGAAGATAAACCATTTAAACAGCAGCTGATTGAATGGCTGAAGGAAAACAACTTGAAGCTTGCTTCAATTACCATTAATGAAACTACTGCTA
TACCAAATGATATGATGAACCCGGATGAATCTGAAGAGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTGATGATGAACAGCCACCTAGCTCTGCTACTTTTCAACAAAAAAGAAAAGTCTCATTTCCTTCTCCAAGGAATAAAATATACTTCTTTGATCCTGAAAGTGC
CCCAAGACCTCTGAAAATTAGAAGCCCAACAAAGAAAAGCCCAAGGGAAAAGCAATGCAAGAAAGTGAAGAACAAAATGGTTTATATTCAGAAACAGAAGGCCCACCAGA
TTGTCAAAGTAACAGAAACTGAAGCAACCTCTTCGGAAGAAATAGAGAACAAAGAAAAGGGGATAAAGCTAGTTGTTGACTTGGGGCCCATGACACCCATAGTCAACTTA
GATAACACAAGCCCAGCTTATCCTATGAACTCACAAAATGCTACTTCTCTATACAACAATACAACAGACAGTGGAGGGCCAATGATCACAAGCGACCAAGAAGACCAAAA
CAATGCAAGTGATGTGCAAGAAGATAAACCATTTAAACAGCAGCTGATTGAATGGCTGAAGGAAAACAACTTGAAGCTTGCTTCAATTACCATTAATGAAACTACTGCTA
TACCAAATGATATGATGAACCCGGATGAATCTGAAGAGATATGA
Protein sequenceShow/hide protein sequence
MVCDDEQPPSSATFQQKRKVSFPSPRNKIYFFDPESAPRPLKIRSPTKKSPREKQCKKVKNKMVYIQKQKAHQIVKVTETEATSSEEIENKEKGIKLVVDLGPMTPIVNL
DNTSPAYPMNSQNATSLYNNTTDSGGPMITSDQEDQNNASDVQEDKPFKQQLIEWLKENNLKLASITINETTAIPNDMMNPDESEEI