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PI0027497 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027497
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtodermal factor 1 like
Genome locationchr01:22971817..22973022
RNA-Seq ExpressionPI0027497
SyntenyPI0027497
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08167.1 uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]6.6e-6289.4Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSS FL LLLLL  +FAAAAE  SAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPE+ATVAKIFGSRA ERYGSEMTLMEAA GA   EEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC
        EATAALLNSYARRRDFPYSAWEVKTL IKALVSKEAAVLQSQRFAFANESC
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC

XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]1.5e-6994.74Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSSRFLNLLLLLCFA AA AE  SARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA DEEEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        EATAALLNSY RRR FPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN

XP_008451248.2 PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]2.9e-6290.07Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSS FL LLLLL  +FAAAAE  SAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA GA   EEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC
        EATAALLNSYARRRDFPYSAWEVKTL IKALVSKEAAVLQSQRFAFANESC
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]6.4e-5781.29Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA---ADEEEEAFGR
        M++ R L+ LLLL FA AAA EA  +RRPGFLFSRT GRCT +FWSSR EAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGR
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA---ADEEEEAFGR

Query:  VVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        VVKEATAALLNSYA RRDFPY+AWEVKTL IKALVSKEAA LQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN

XP_038899192.1 uncharacterized protein LOC120086555 [Benincasa hispida]5.9e-6387.97Show/hide
Query:  MDSSRFLN-LLLLLCF--AFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA---GAADEEEEA
        MDSSR  N LLLLLCF  A A AAEA S RRPGFLFSRT GRCTAQFWSS  EAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA    AADEEEEA
Subjt:  MDSSRFLN-LLLLLCF--AFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA---GAADEEEEA

Query:  FGRVVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        FGRVVKEAT ALLNSYARRR+FPYSAWEVKTLFIKALVSKEAAVLQS+RFAFANESCN
Subjt:  FGRVVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein7.1e-7094.74Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSSRFLNLLLLLCFA AA AE  SARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA DEEEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        EATAALLNSY RRR FPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN

A0A1S3BQF6 uncharacterized protein LOC1034925951.4e-6290.07Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSS FL LLLLL  +FAAAAE  SAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA GA   EEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC
        EATAALLNSYARRRDFPYSAWEVKTL IKALVSKEAAVLQSQRFAFANESC
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC

A0A5A7UZL8 Uncharacterized protein1.4e-6290.07Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSS FL LLLLL  +FAAAAE  SAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA GA   EEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC
        EATAALLNSYARRRDFPYSAWEVKTL IKALVSKEAAVLQSQRFAFANESC
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC

A0A5D3C871 Uncharacterized protein3.2e-6289.4Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK
        MDSS FL LLLLL  +FAAAAE  SAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPE+ATVAKIFGSRA ERYGSEMTLMEAA GA   EEE FGRVVK
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVK

Query:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC
        EATAALLNSYARRRDFPYSAWEVKTL IKALVSKEAAVLQSQRFAFANESC
Subjt:  EATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESC

A0A6J1GR22 uncharacterized protein LOC1114562703.1e-5781.29Show/hide
Query:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA---ADEEEEAFGR
        M++ R L+ LLLL FA AAA EA  +RRPGFLFSRT GRCT +FWSSR EAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGR
Subjt:  MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGA---ADEEEEAFGR

Query:  VVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        VVKEATAALLNSYA RRDFPY+AWEVKTL IKALVSKEAA LQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein3.5e-0535.4Show/hide
Query:  CTAQFWSSRSEA--WPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVKEATAALLNSYARRRDFPYSAWEVKTLFIKALV--SKE
        C+ Q W        W  + P++  VA  FG  A   YG++MT+ EA  G      EA+  +++EAT ALLNSY     FPY++  V T    AL+  S+ 
Subjt:  CTAQFWSSRSEA--WPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVKEATAALLNSYARRRDFPYSAWEVKTLFIKALV--SKE

Query:  AAVLQSQRFAFAN
          ++ + RF  AN
Subjt:  AAVLQSQRFAFAN

AT2G20515.1 unknown protein2.2e-3151.03Show/hide
Query:  LLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAGAADEEEEAFGRVVKEATAALL
        L+L+  F     A   SA RPGF+++R  GRCT Q+WSS+ EAWPRM PE +TV KIFG   A ER+ S++TL+E+ A   DEE  A+G ++K+  AAL+
Subjt:  LLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAGAADEEEEAFGRVVKEATAALL

Query:  NSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
        NSYA R+ F Y+ WEVKT+ I+A+VS+ AA  Q++ FA AN +C+
Subjt:  NSYARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTTCTCGCTTTCTCAATCTTCTTCTCCTTCTCTGTTTCGCCTTCGCCGCCGCCGCCGAAGCAGTATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTAC
AGGAAGATGCACTGCACAGTTCTGGAGTAGTAGGAGTGAGGCTTGGCCACGGATGGCACCGGAATCTGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGT
ATGGATCTGAGATGACGTTAATGGAAGCGGCAGCGGGTGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTAT
GCTAGAAGAAGGGATTTTCCATATTCTGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGC
TAATGAGTCTTGTAATTAG
mRNA sequenceShow/hide mRNA sequence
GTGTAAGATTCACACACTTTAAAGTTGTTTTTGACGAAGAAGCGAGAGAAATGAACGAATTGGTGGAGCAAGAAGCTTTACACACACTTATTTAGGTCAAATTGGTACTT
TGAAAAGGCTAAAGGAAGCAAAAGTCAGTCTTGTGAGTATTTTTTTAACCTTAAATCGTTTTTGATTTAGCCGTTTCGAGGGTCATCCGTACAAAATATTTCCAAACCCC
ACCCTTTATCTAAAAGTGGGACACAGAGATTTTTTTAACTTTCTTCGAAGAAATCCAAAGAAATTCTTCCCCCAAATCGTGAGATTATGGACTCTTCTCGCTTTCTCAAT
CTTCTTCTCCTTCTCTGTTTCGCCTTCGCCGCCGCCGCCGAAGCAGTATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCACAGTTCTG
GAGTAGTAGGAGTGAGGCTTGGCCACGGATGGCACCGGAATCTGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGG
AAGCGGCAGCGGGTGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGCTAGAAGAAGGGATTTTCCATAT
TCTGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAGTCATT
ACTTTCACGACACAACCCTCCATCCATCTGCTCGAAGTAAATAAATGTTGAAGAATTAGATGGGTTGTCTCCTTAATACGTTGATAATCTTTGTCAATGTATGTTTGACT
CGGATTTCAAAATAGTTGGTGTTGTAATGATTCGTGTTTAGGATTGAAAGAGAATGATAGTGCGAAATTAAGGAAAAACGACTTAAAGAATAAAGTAGAAGGAACCCTTT
TGTAA
Protein sequenceShow/hide protein sequence
MDSSRFLNLLLLLCFAFAAAAEAVSARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAADEEEEAFGRVVKEATAALLNSY
ARRRDFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN