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PI0027522 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027522
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:12701838..12702371
RNA-Seq ExpressionPI0027522
SyntenyPI0027522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.4e-2663.92Show/hide
Query:  NNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   EQN AY+AHDLD+PI+SYA+PNLY+FN  IAY  FGEN  FEIK +ML + Q   QFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]9.7e-3365.45Show/hide
Query:  DNNNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISL
        + NN+ +P  QAA   N  Y+A D DRPIRSYA+PNLY+FN  IAYP F EN RFEIK VMLQ+IQ   QF  HP +DPH++IR+FYSICASFHMPGIS+
Subjt:  DNNNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISL

Query:  EELRFALFLL
        EELRF  F L
Subjt:  EELRFALFLL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]5.2e-2664.65Show/hide
Query:  NNNRNVPPPQAAHEQ-NAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        N N  VP   A   Q N   +AH+LD PIR+Y + NLY+FNL IAY VFGENA FE+KPVMLQ+IQK  QF G+ GEDPHEHI+SFYSICASFHM   S
Subjt:  NNNRNVPPPQAAHEQ-NAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.0e-3447.31Show/hide
Query:  FMIDGEQPEFDLVSEIERTFWHNRRRRRQ----RNVQRIDNN---NRNVP-PPQAAHEQNA------------AYMAHDLDRPIRSYAAPNLYNFNLEIA
        +M +G+ P FD+  EIERTF   RRR RQ    R+ Q I+ N     N P  PQA   QNA              +AHD +RP+R YA+PNLYNF   I 
Subjt:  FMIDGEQPEFDLVSEIERTFWHNRRRRRQ----RNVQRIDNN---NRNVP-PPQAAHEQNA------------AYMAHDLDRPIRSYAAPNLYNFNLEIA

Query:  YPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLTLRDEAKRWANTLEDGEVGTW
         P F  N RFE+KPVMLQ++Q   QFGG  GEDPH H++SF  IC++F M G+  + +R  LF  +LRDEA++WA + E GE+ TW
Subjt:  YPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLTLRDEAKRWANTLEDGEVGTW

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]7.2e-2844.24Show/hide
Query:  PEFDLVSEIERTFWHNRRRRR--QRNVQRIDNNNRNVPPPQAAHE---QNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQK
        PEF+   EI+ TF     + R  +R +   DNNN   P          Q+  ++A D + PIR+YAAPNLY+F+  I+ P+  ENARFEIKPVM+Q+IQ 
Subjt:  PEFDLVSEIERTFWHNRRRRR--QRNVQRIDNNNRNVPPPQAAHE---QNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQK

Query:  VRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLTLRDEAKRWANTLEDGEVGTWD
        +RQF     E+PH H+  F  +C++F +PGI+   +R  LF  TLRD+AKRWA++LE  E+ + D
Subjt:  VRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLTLRDEAKRWANTLEDGEVGTWD

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.6e-2648.06Show/hide
Query:  QRIDNNNRNVPPPQAAH--EQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHM
        +R DN N      + A+   +N   +AH+L+ PI  YA+P+LY FNL I YP FG NARF++KP ML +IQ   QFGG+  EDP +HI+S Y +C+SFH+
Subjt:  QRIDNNNRNVPPPQAAH--EQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHM

Query:  PGISLEELRFALFLLTLRDEAKRWANTLE
        P +S E+L    F  TL+D+ K+W  TLE
Subjt:  PGISLEELRFALFLLTLRDEAKRWANTLE

A0A5A7UDN8 Uncharacterized protein6.6e-2763.92Show/hide
Query:  NNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   EQN AY+AHDLD+PI+SYA+PNLY+FN  IAY  FGEN  FEIK +ML + Q   QFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 14.7e-3365.45Show/hide
Query:  DNNNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISL
        + NN+ +P  QAA   N  Y+A D DRPIRSYA+PNLY+FN  IAYP F EN RFEIK VMLQ+IQ   QF  HP +DPH++IR+FYSICASFHMPGIS+
Subjt:  DNNNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISL

Query:  EELRFALFLL
        EELRF  F L
Subjt:  EELRFALFLL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 12.5e-2664.65Show/hide
Query:  NNNRNVPPPQAAHEQ-NAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        N N  VP   A   Q N   +AH+LD PIR+Y + NLY+FNL IAY VFGENA FE+KPVMLQ+IQK  QF G+ GEDPHEHI+SFYSICASFHM   S
Subjt:  NNNRNVPPPQAAHEQ-NAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGIS

U5CUK7 Uncharacterized protein3.5e-2047.11Show/hide
Query:  AAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLT
        A +E N   +A D  R IR YAAP     N  I  P   +   FE+KPVM Q++Q V QFGG P EDPH HIRSF  +  SF + G+S E LR  LF  +
Subjt:  AAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVIQKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLT

Query:  LRDEAKRWANTLEDGEVGTWD
        LRD A+ W NTL    V  W+
Subjt:  LRDEAKRWANTLEDGEVGTWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAACCCAAAGAACGTGTGTCCAAGTTTATGATTGACGGTGAACAACCAGAATTCGACCTTGTCTCTGAGATTGAACGAACATTTTGGCATAACAGAAGAAGACG
AAGGCAGAGAAACGTGCAGAGAATTGATAACAATAATAGAAACGTACCGCCTCCGCAAGCTGCCCATGAGCAGAACGCCGCCTACATGGCGCATGATTTAGATAGACCAA
TTAGGTCTTATGCTGCACCCAACCTTTATAACTTCAACCTAGAAATCGCCTACCCTGTGTTCGGCGAGAATGCGAGATTCGAGATCAAACCTGTCATGTTGCAGGTGATC
CAGAAGGTCAGACAGTTCGGTGGTCATCCTGGGGAAGATCCACACGAGCACATAAGGAGTTTCTACTCTATCTGCGCATCCTTTCATATGCCAGGCATCTCGCTCGAAGA
ATTAAGATTCGCACTTTTCCTGTTAACTCTAAGGGATGAGGCAAAGAGATGGGCGAACACCTTAGAAGATGGCGAGGTGGGAACTTGGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAACCCAAAGAACGTGTGTCCAAGTTTATGATTGACGGTGAACAACCAGAATTCGACCTTGTCTCTGAGATTGAACGAACATTTTGGCATAACAGAAGAAGACG
AAGGCAGAGAAACGTGCAGAGAATTGATAACAATAATAGAAACGTACCGCCTCCGCAAGCTGCCCATGAGCAGAACGCCGCCTACATGGCGCATGATTTAGATAGACCAA
TTAGGTCTTATGCTGCACCCAACCTTTATAACTTCAACCTAGAAATCGCCTACCCTGTGTTCGGCGAGAATGCGAGATTCGAGATCAAACCTGTCATGTTGCAGGTGATC
CAGAAGGTCAGACAGTTCGGTGGTCATCCTGGGGAAGATCCACACGAGCACATAAGGAGTTTCTACTCTATCTGCGCATCCTTTCATATGCCAGGCATCTCGCTCGAAGA
ATTAAGATTCGCACTTTTCCTGTTAACTCTAAGGGATGAGGCAAAGAGATGGGCGAACACCTTAGAAGATGGCGAGGTGGGAACTTGGGACTAA
Protein sequenceShow/hide protein sequence
MFKPKERVSKFMIDGEQPEFDLVSEIERTFWHNRRRRRQRNVQRIDNNNRNVPPPQAAHEQNAAYMAHDLDRPIRSYAAPNLYNFNLEIAYPVFGENARFEIKPVMLQVI
QKVRQFGGHPGEDPHEHIRSFYSICASFHMPGISLEELRFALFLLTLRDEAKRWANTLEDGEVGTWD