; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027555 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027555
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:11801648..11802034
RNA-Seq ExpressionPI0027555
SyntenyPI0027555
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046821.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-5276.38Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEK  AG F D+W +LDN+S+LP+LS+EIPLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.4e-5275.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEKP AG F D+W  LDN+S+LP+LS+E+PLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G +TKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]1.0e-5275.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL++EKP AG F D+W  LDN+S+LP+LS+EIPLS GKSAW+LQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.4e-5275.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEKP AG F D+W  LDN+S+LP+LS+EIPLS GKSAW+LQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G +TKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-5276.38Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEK  AG F D+W +LDN+S+LP+LS+EIPLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein6.6e-5375.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEKP AG F D+W  LDN+S+LP+LS+E+PLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G +TKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

A0A5A7TZN9 Putative mitochondrial protein1.5e-5276.38Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEK  AG F D+W +LDN+S+LP+LS+EIPLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

A0A5A7U8L3 PMD domain-containing protein5.1e-5375.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL++EKP AG F D+W  LDN+S+LP+LS+EIPLS GKSAW+LQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

A0A5A7UET3 Putative mitochondrial protein6.6e-5375.59Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEKP AG F D+W  LDN+S+LP+LS+EIPLS GKSAW+LQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G +TKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

A0A5D3C267 Putative mitochondrial protein1.5e-5276.38Show/hide
Query:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW
        MVYFTE+FL G RHL ILSD NQPREDGLSL+VEK  AG F D+W +LDN+S+LP+LS+EIPLS GKSAWVLQSSIH+EAPN+ R LTL  R+IEGQTRW
Subjt:  MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRW

Query:  GAMTKVPGELCFTDCYWEWLEFVVGQS
        G MTKVPGE CFTDCYWEWLE VVG++
Subjt:  GAMTKVPGELCFTDCYWEWLEFVVGQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACAGTTCTTGTTTGGGAATAGGCACCTTACAATCCTTTCTGATGAGAATCAACCAAGAGAAGACGGTCTTAGTCTCCTTGTAGAGAAGCCATT
GGCTGGTCCTTTTGTAGATTATTGGGCGAACCTGGATAACAGCTCGATTCTTCCCAAATTGTCTATGGAGATACCTTTGTCTTATGGAAAAAGCGCATGGGTCCTGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCGATCGAGTCCTCACTCTCGAACATCGTATAATTGAAGGTCAAACCCGTTGGGGTGCTATGACTAAAGTCCCAGGAGAGTTA
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCAAAGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACAGTTCTTGTTTGGGAATAGGCACCTTACAATCCTTTCTGATGAGAATCAACCAAGAGAAGACGGTCTTAGTCTCCTTGTAGAGAAGCCATT
GGCTGGTCCTTTTGTAGATTATTGGGCGAACCTGGATAACAGCTCGATTCTTCCCAAATTGTCTATGGAGATACCTTTGTCTTATGGAAAAAGCGCATGGGTCCTGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCGATCGAGTCCTCACTCTCGAACATCGTATAATTGAAGGTCAAACCCGTTGGGGTGCTATGACTAAAGTCCCAGGAGAGTTA
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCAAAGTGGGTGA
Protein sequenceShow/hide protein sequence
MVYFTEQFLFGNRHLTILSDENQPREDGLSLLVEKPLAGPFVDYWANLDNSSILPKLSMEIPLSYGKSAWVLQSSIHDEAPNADRVLTLEHRIIEGQTRWGAMTKVPGEL
CFTDCYWEWLEFVVGQSG