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PI0027558 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027558
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:967684..967848
RNA-Seq ExpressionPI0027558
SyntenyPI0027558
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
KAA0054148.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
KAA0054554.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein3.3e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
A0A5A7UGH9 Retrotransposon protein3.3e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
A0A5A7VG29 Retrotransposon protein3.3e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
A0A5A7VHB0 Retrotransposon protein3.3e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
A0A5D3D9Z3 Retrotransposon protein3.3e-1470.37Show/hide
Query:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
        MT+ ++ ++ DE DST+ATTA DDIHY++TSNEWSQWRDDLA+E+F+EWELRNQ
Subjt:  MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCGCCAATGTGACAGAGGACTACGACGAGGGTGATTCGACGTATGCAACAACTGCATGTGACGACATCCACTACATGAAAACCTCCAATGAATGGAGTCAATG
GAGGGATGATCTAGCTAAAGAACTATTCAGTGAATGGGAGTTACGTAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGCGCCAATGTGACAGAGGACTACGACGAGGGTGATTCGACGTATGCAACAACTGCATGTGACGACATCCACTACATGAAAACCTCCAATGAATGGAGTCAATG
GAGGGATGATCTAGCTAAAGAACTATTCAGTGAATGGGAGTTACGTAATCAGTAG
Protein sequenceShow/hide protein sequence
MTSANVTEDYDEGDSTYATTACDDIHYMKTSNEWSQWRDDLAKELFSEWELRNQ