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PI0027572 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027572
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr12:8360030..8360524
RNA-Seq ExpressionPI0027572
SyntenyPI0027572
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]2.8e-8291.46Show/hide
Query:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK
        MIP MQKV SFT+FLTSDPSPFPSLLL+LLIFTFHIP CRFFSYHHFPW PLFYYNCVGNHKILCNP+P SSPRRLP GGWALRAAPIALLVVVSWLSQK
Subjt:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
        ESAGV+ARKWGSQGC VSTISEHKAEDEEIGGCTPWVLVG+IVLLFNMAQRQAL+R CLFVRSM
Subjt:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]5.8e-8092.07Show/hide
Query:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK
        MIP MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHI  CRFFSYHHFP  PLFYYNCVGNHKILCNP+PISSPRRLP GGWALRAAPIALLVVVSWLSQK
Subjt:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
        ESAGV+ARKW SQG RVSTISEHKAE EEIGGCTPWVLVGMIVLLFNMAQRQAL+R CLFVRSM
Subjt:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5770.73Show/hide
Query:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK
        MIP M K+SS TH LTSDPSPFPSLLLLLLIFT HIPTCRFFSY     P L YY+C G    LCNP+ +SSP+RLPCGGW+LR APIALLVVVSWL++K
Subjt:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVSARKWGSQGCRVSTI---SEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFV
        ++ GV+AR WGS+ C V TI    +H+ E E IGGCTPWVLVGMI+LLFNMAQRQAL+R CLFV
Subjt:  ESAGVSARKWGSQGCRVSTI---SEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein1.2e-7892.5Show/hide
Query:  MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQKESAG
        MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHI  CRFFSYHHFP  PLFYYNCVGNHKILCNP+PISSPRRLP GGWALRAAPIALLVVVSWLSQKESAG
Subjt:  MQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQKESAG

Query:  VSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
        V+ARKW SQG RVSTISEHKAE EEIGGCTPWVLVGMIVLLFNMAQRQAL+R CLFVRSM
Subjt:  VSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
A0A5A7TJ52 Uncharacterized protein1.3e-8291.46Show/hide
Query:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK
        MIP MQKV SFT+FLTSDPSPFPSLLL+LLIFTFHIP CRFFSYHHFPW PLFYYNCVGNHKILCNP+P SSPRRLP GGWALRAAPIALLVVVSWLSQK
Subjt:  MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQK

Query:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
        ESAGV+ARKWGSQGC VSTISEHKAEDEEIGGCTPWVLVG+IVLLFNMAQRQAL+R CLFVRSM
Subjt:  ESAGVSARKWGSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCACAATGCAAAAAGTCTCATCTTTTACACATTTTCTTACTTCCGATCCCTCACCCTTCCCTTCGCTTCTCCTTCTCCTCCTCATCTTCACCTTCCATATCCC
TACATGTCGTTTCTTCTCTTACCACCATTTTCCATGGCCGCCTCTTTTCTATTACAATTGTGTTGGCAATCATAAGATACTCTGCAATCCCCTTCCAATATCCAGTCCTA
GAAGATTGCCTTGTGGTGGTTGGGCTTTACGAGCAGCGCCAATCGCCTTACTCGTGGTTGTGAGTTGGTTGAGTCAGAAGGAATCAGCAGGAGTTTCTGCCAGGAAGTGG
GGGTCTCAGGGCTGCCGTGTTTCAACCATTTCAGAACACAAGGCAGAGGATGAAGAAATTGGTGGTTGTACTCCTTGGGTTCTTGTTGGAATGATAGTACTACTATTCAA
TATGGCTCAACGGCAGGCACTCGTTCGGCGCTGCTTGTTTGTAAGAAGTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCACAATGCAAAAAGTCTCATCTTTTACACATTTTCTTACTTCCGATCCCTCACCCTTCCCTTCGCTTCTCCTTCTCCTCCTCATCTTCACCTTCCATATCCC
TACATGTCGTTTCTTCTCTTACCACCATTTTCCATGGCCGCCTCTTTTCTATTACAATTGTGTTGGCAATCATAAGATACTCTGCAATCCCCTTCCAATATCCAGTCCTA
GAAGATTGCCTTGTGGTGGTTGGGCTTTACGAGCAGCGCCAATCGCCTTACTCGTGGTTGTGAGTTGGTTGAGTCAGAAGGAATCAGCAGGAGTTTCTGCCAGGAAGTGG
GGGTCTCAGGGCTGCCGTGTTTCAACCATTTCAGAACACAAGGCAGAGGATGAAGAAATTGGTGGTTGTACTCCTTGGGTTCTTGTTGGAATGATAGTACTACTATTCAA
TATGGCTCAACGGCAGGCACTCGTTCGGCGCTGCTTGTTTGTAAGAAGTATGTGA
Protein sequenceShow/hide protein sequence
MIPTMQKVSSFTHFLTSDPSPFPSLLLLLLIFTFHIPTCRFFSYHHFPWPPLFYYNCVGNHKILCNPLPISSPRRLPCGGWALRAAPIALLVVVSWLSQKESAGVSARKW
GSQGCRVSTISEHKAEDEEIGGCTPWVLVGMIVLLFNMAQRQALVRRCLFVRSM