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PI0027576 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027576
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:10882215..10882379
RNA-Seq ExpressionPI0027576
SyntenyPI0027576
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++F+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE++FSDWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1472.22Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++FSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.9e-1472.22Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++FSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE++FSDWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7UIM7 Putative nuclease HARBI14.4e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++F+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein3.3e-1472.22Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++FSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
A0A5A7VLF4 Putative nuclease HARBI17.4e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE++FSDWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI13.3e-1472.22Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE++FSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
A0A5D3CKZ1 Putative nuclease HARBI17.4e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE++FSDWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATATTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATATTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKIFSDWELRNQ