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PI0027600 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027600
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase SHPRH isoform X4
Genome locationchr04:21503943..21504155
RNA-Seq ExpressionPI0027600
SyntenyPI0027600
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051973.1 E3 ubiquitin-protein ligase SHPRH isoform X4 [Cucumis melo var. makuwa]2.3e-0969.49Show/hide
Query:  EENLTMFHYVIPMKIHKKIMKLGMNSKRMTLQVAMNKKISRITMTKGEWDELIEGKKQE
        E + TMFH+V+  KI KKIMKL  NSK+ TLQVAM+K IS ITMTK EWD+LIEGKK E
Subjt:  EENLTMFHYVIPMKIHKKIMKLGMNSKRMTLQVAMNKKISRITMTKGEWDELIEGKKQE
TrEMBL top hitse value%identityAlignment
A0A5A7U7S6 E3 ubiquitin-protein ligase SHPRH isoform X41.1e-0969.49Show/hide
Query:  EENLTMFHYVIPMKIHKKIMKLGMNSKRMTLQVAMNKKISRITMTKGEWDELIEGKKQE
        E + TMFH+V+  KI KKIMKL  NSK+ TLQVAM+K IS ITMTK EWD+LIEGKK E
Subjt:  EENLTMFHYVIPMKIHKKIMKLGMNSKRMTLQVAMNKKISRITMTKGEWDELIEGKKQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGAAGAAAACCTGACGATGTTCCACTACGTTATACCAATGAAGATTCATAAGAAGATTATGAAGCTTGGCATGAACAGCAAGAGGATGACTCTTCAAGTGGC
GATGAACAAGAAAATATCTAGAATTACAATGACGAAAGGCGAATGGGACGAATTAATAGAAGGCAAGAAGCAAGAATGGAAGTTCACCATGATTATAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGAAGAAAACCTGACGATGTTCCACTACGTTATACCAATGAAGATTCATAAGAAGATTATGAAGCTTGGCATGAACAGCAAGAGGATGACTCTTCAAGTGGC
GATGAACAAGAAAATATCTAGAATTACAATGACGAAAGGCGAATGGGACGAATTAATAGAAGGCAAGAAGCAAGAATGGAAGTTCACCATGATTATAAAATGA
Protein sequenceShow/hide protein sequence
MIGEENLTMFHYVIPMKIHKKIMKLGMNSKRMTLQVAMNKKISRITMTKGEWDELIEGKKQEWKFTMIIK