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PI0027605 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027605
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr07:16202572..16203950
RNA-Seq ExpressionPI0027605
SyntenyPI0027605
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]1.1e-1047.73Show/hide
Query:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK
        PRK+VLE+ VDDP  KGK IT +  SE   PSPPK+T  Q      S++ D+Y+KFI +  GKPM DG E++ Q   + QE  +R +K
Subjt:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]3.2e-1053.75Show/hide
Query:  EIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEKQILDLELKINN---HHQ
        E  AP P KQ  +Q  N       +D Y+KFI DT GKP+MDG +++ Q  VDLQE   RHEKQI DLELKI+N   HHQ
Subjt:  EIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEKQILDLELKINN---HHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]2.2e-1150Show/hide
Query:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK
        PRK+VLE+ VDDP  KGK IT +  SE   PSPPK+T  Q      S+E D+Y+KFI +  GKPM DG E++ Q   + QE  +R EK
Subjt:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]2.2e-1155Show/hide
Query:  KKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQE
        K V EEPVDD   KGKQI +E+  E   PSP KQT +Q  N      ++D Y+KFI+DT GKPMMD LE+I Q   DLQE
Subjt:  KKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]4.6e-0934.65Show/hide
Query:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL
        +E   +  +  ++  K +LE+ +DDP  K KQ+  E+ S+ R PSPPKQ        T+ + +  DDD     Y+KFIN+ + +P+  G E++ Q   +L
Subjt:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL

Query:  QERAMRHEKQILDLELKINNH---HQA
        QE  ++++K + DLELK ++    HQA
Subjt:  QERAMRHEKQILDLELKINNH---HQA

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein5.2e-1147.73Show/hide
Query:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK
        PRK+VLE+ VDDP  KGK IT +  SE   PSPPK+T  Q      S++ D+Y+KFI +  GKPM DG E++ Q   + QE  +R +K
Subjt:  PRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQ-----PSNEDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEK

A0A5A7TJU0 Uncharacterized protein2.2e-0934.65Show/hide
Query:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL
        +E   +  +  ++  K +LE+ +DDP  K KQ+  E+ S+ R PSPPKQ        T+ + +  DDD     Y+KFIN+ + +P+  G E++ Q   +L
Subjt:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL

Query:  QERAMRHEKQILDLELKINNH---HQA
        QE  ++++K + DLELK ++    HQA
Subjt:  QERAMRHEKQILDLELKINNH---HQA

A0A5A7U0L9 Uncharacterized protein1.5e-1053.75Show/hide
Query:  EIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEKQILDLELKINN---HHQ
        E  AP P KQ  +Q  N       +D Y+KFI DT GKP+MDG +++ Q  VDLQE   RHEKQI DLELKI+N   HHQ
Subjt:  EIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQERAMRHEKQILDLELKINN---HHQ

A0A5D3DK59 Gag-pol1.1e-1155Show/hide
Query:  KKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQE
        K V EEPVDD   KGKQI +E+  E   PSP KQT +Q  N      ++D Y+KFI+DT GKPMMD LE+I Q   DLQE
Subjt:  KKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQPSN------EDDDYYKFINDTIGKPMMDGLENISQTHVDLQE

A0A5D3E1H0 Uncharacterized protein2.2e-0934.65Show/hide
Query:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL
        +E   +  +  ++  K +LE+ +DDP  K KQ+  E+ S+ R PSPPKQ        T+ + +  DDD     Y+KFIN+ + +P+  G E++ Q   +L
Subjt:  EEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQ--------TEDQPSNEDDD-----YYKFINDTIGKPMMDGLENISQTHVDL

Query:  QERAMRHEKQILDLELKINNH---HQA
        QE  ++++K + DLELK ++    HQA
Subjt:  QERAMRHEKQILDLELKINNH---HQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAATGAGGTCAAAAGAAGACTCCTCAAGACTAAGAAAGCTAGAAAAGAAATTAAGGATGATGAAGTGGAGATTGAAGAAGAAGAGCAAAGGAAGAGTAAAAC
GTCAAGCCCAATGATCCCAAGAAAAAAAGTCTTGGAGGAGCCGGTTGATGACCCATTCCCCAAAGGTAAGCAAATCACCTTTGAGAACACAAGTGAGATACGTGCTCCCT
CACCGCCTAAACAAACAGAAGACCAACCAAGTAATGAGGATGATGATTATTATAAGTTCATCAATGATACAATTGGAAAACCAATGATGGATGGACTTGAAAATATTTCC
CAAACCCATGTAGATCTGCAAGAACGCGCGATGAGACATGAAAAGCAGATTCTGGACTTGGAGTTAAAGATCAATAATCATCATCAAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAATGAGGTCAAAAGAAGACTCCTCAAGACTAAGAAAGCTAGAAAAGAAATTAAGGATGATGAAGTGGAGATTGAAGAAGAAGAGCAAAGGAAGAGTAAAAC
GTCAAGCCCAATGATCCCAAGAAAAAAAGTCTTGGAGGAGCCGGTTGATGACCCATTCCCCAAAGGTAAGCAAATCACCTTTGAGAACACAAGTGAGATACGTGCTCCCT
CACCGCCTAAACAAACAGAAGACCAACCAAGTAATGAGGATGATGATTATTATAAGTTCATCAATGATACAATTGGAAAACCAATGATGGATGGACTTGAAAATATTTCC
CAAACCCATGTAGATCTGCAAGAACGCGCGATGAGACATGAAAAGCAGATTCTGGACTTGGAGTTAAAGATCAATAATCATCATCAAGCGTAG
Protein sequenceShow/hide protein sequence
MAKNEVKRRLLKTKKARKEIKDDEVEIEEEEQRKSKTSSPMIPRKKVLEEPVDDPFPKGKQITFENTSEIRAPSPPKQTEDQPSNEDDDYYKFINDTIGKPMMDGLENIS
QTHVDLQERAMRHEKQILDLELKINNHHQA