CuGenDBv2

Gene ID	PI0027627
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	cytochrome c oxidase assembly factor 6
Genome location	chr02:20586959..20590851
RNA-Seq Expression	PI0027627
Synteny	PI0027627
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

2.4e-44

91.92

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MAVEAD SGGSD VH+DVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA+YVK CRASWVKHFDRKFCQNSRVQRLLDDKD R+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

XP_008443874.1 PREDICTED: uncharacterized protein LOC103487365 isoform X2 [Cucumis melo]

8.4e-45

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV
        MAVEAD SGGSD VH+DVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA+YVK CRASWVKHFDRKFCQNSRVQRLLDDKD R+V
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV

XP_011655954.1 uncharacterized protein LOC101212489 isoform X2 [Cucumis sativus]

2.1e-43

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV
        MA EAD SGGSD VH+DVLSESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECK LRA+Y K CRASWVKHFDRKFCQNSRVQRLLDDKD R+V
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV

XP_031745355.1 cytochrome c oxidase assembly factor 6 isoform X3 [Cucumis sativus]

2.1e-43

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV
        MA EAD SGGSD VH+DVLSESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECK LRA+Y K CRASWVKHFDRKFCQNSRVQRLLDDKD R+V
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

1.6e-43

90.91

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MAVEAD SGG D VHSDVL+ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA +VK CRASWVKHFDRKFCQNSRVQRLLDDKDSR+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTX1 Uncharacterized protein

2.9e-43

88.89

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MA EAD SGGSD VH+DVLSESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECK LRA+Y K CRASWVKHFDRKFCQNSRVQRLLDDKD R+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

A0A1S3B914 uncharacterized protein LOC103487365 isoform X2

4.0e-45

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV
        MAVEAD SGGSD VH+DVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA+YVK CRASWVKHFDRKFCQNSRVQRLLDDKD R+V
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKV

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

1.2e-44

91.92

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MAVEAD SGGSD VH+DVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA+YVK CRASWVKHFDRKFCQNSRVQRLLDDKD R+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

1.2e-44

91.92

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MAVEAD SGGSD VH+DVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA+YVK CRASWVKHFDRKFCQNSRVQRLLDDKD R+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

A0A6J1BZF0 uncharacterized protein LOC111006886

2.9e-43

89.9

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MAVEAD SGG D VHSDVL+ SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECK LRA +VK CRASWVKHFDRKFCQNSRVQRLLDDKDSR+
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

2.1e-33

64.65

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MA++   S   + VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +V  CR+SWVKHFDR++C+N RVQRLLDD D RK
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

2.1e-33

64.65

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Query:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK
        MA++   S   + VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +V  CR+SWVKHFDR++C+N RVQRLLDD D RK
Subjt:  MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRK

Sequences

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CDS sequence

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mRNA sequence

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ATGGCTGTCGAAGCTGACCCATCTGGAGGCTCCGATGTAGTTCATAGCGACGTTCTATCGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCCGTTGGCCTTATTTACCCTGCCGAGTGTAAAACTTTGAGAGCCAATTATGTCAAATTTTGCAGAGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTCGAGGAAAGTTACCTTGTGAGGAAAGCAGCATCGAACCAGG
AGGCTCCGTAGCACTGATTGGATGTCTTGGGACTTGGGAGTAAGACTGATGATTGAAATAGGTTTCCAGACGTGGTAAGACCAAGAGCCCTTGTTAAGGAACACCCTTTG
ATTAACGAGTCTTTTTCTTCTCCTCCTAGAAAATTAGGATATCTTTTAGGAGATGTTTGGTCCATCGACTTCATAATTCAATGTTTTTTAACTCAAGTTTACCAACTTTA
ATAGTGTTCACTATTGAATTTTACATGTTTATTAAAGAACTTCATTTTTT

Protein sequence

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MAVEADPSGGSDVVHSDVLSESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKTLRANYVKFCRASWVKHFDRKFCQNSRVQRLLDDKDSRKVTL

PI0027627 (gene) of Melon (PI 482460) v1 genome