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PI0027649 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027649
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:17642509..17642715
RNA-Seq ExpressionPI0027649
SyntenyPI0027649
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.4e-1161.29Show/hide
Query:  NNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQM
        NNQN P  Q  QEQN AY+AHDL++PI+SYA PN Y+F+P IAY  FG+N  FEIK +M+ M
Subjt:  NNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQM

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]4.5e-1052.24Show/hide
Query:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        +N+ NNQ  P NQA Q  NL Y+AH+ +RPIRS   PN Y F+P I YP FG+N +F+IK VM+ ++
Subjt:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]6.6e-1463.64Show/hide
Query:  NNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        NN NNQ +P NQAAQ  N  Y+A D +RPIRSYA PN Y+F+P IAYP F +N +FEIKLVM+Q+I
Subjt:  NNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]4.5e-1052.24Show/hide
Query:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        +N+ NNQ  P NQA Q  NL Y+AH+ +RPIRS   PN Y F+P I YP FG+N +F+IK VM+ ++
Subjt:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.1e-0751.43Show/hide
Query:  MANNNNNQNVPPNQAAQE--QNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        MA+NNNN+    NQ      Q+  ++A D N PIR+YA PN Y+FSP I+ P+  +NA+FEIK VM+QMI
Subjt:  MANNNNNQNVPPNQAAQE--QNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein1.1e-1161.29Show/hide
Query:  NNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQM
        NNQN P  Q  QEQN AY+AHDL++PI+SYA PN Y+F+P IAY  FG+N  FEIK +M+ M
Subjt:  NNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQM

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.62.2e-1052.24Show/hide
Query:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        +N+ NNQ  P NQA Q  NL Y+AH+ +RPIRS   PN Y F+P I YP FG+N +F+IK VM+ ++
Subjt:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.2e-1463.64Show/hide
Query:  NNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        NN NNQ +P NQAAQ  N  Y+A D +RPIRSYA PN Y+F+P IAYP F +N +FEIKLVM+Q+I
Subjt:  NNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.0e-0756.52Show/hide
Query:  MANNNNNQNVPPNQAAQEQ-NLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        MA+N NN  VP N A Q Q NL  +AH+L+ PIR+Y   N Y+F+  IAY VFG+NA FE+K VM+QMI
Subjt:  MANNNNNQNVPPNQAAQEQ-NLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.62.2e-1052.24Show/hide
Query:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI
        +N+ NNQ  P NQA Q  NL Y+AH+ +RPIRS   PN Y F+P I YP FG+N +F+IK VM+ ++
Subjt:  ANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACAACAACAACAACCAAAATGTTCCTCCCAATCAAGCTGCCCAAGAACAGAACCTCGCCTATATGGCCCACGATTTAAACAGACCGATTAGGTCGTATGCTTT
GCCAAATTTCTACAACTTTAGCCCAGACATTGCCTACCCTGTGTTCGGCAAGAATGCACAATTTGAGATTAAACTTGTTATGATACAAATGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACAACAACAACAACCAAAATGTTCCTCCCAATCAAGCTGCCCAAGAACAGAACCTCGCCTATATGGCCCACGATTTAAACAGACCGATTAGGTCGTATGCTTT
GCCAAATTTCTACAACTTTAGCCCAGACATTGCCTACCCTGTGTTCGGCAAGAATGCACAATTTGAGATTAAACTTGTTATGATACAAATGATATAG
Protein sequenceShow/hide protein sequence
MANNNNNQNVPPNQAAQEQNLAYMAHDLNRPIRSYALPNFYNFSPDIAYPVFGKNAQFEIKLVMIQMI