; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0027666 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027666
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationchr06:4923908..4925591
RNA-Seq ExpressionPI0027666
SyntenyPI0027666
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]1.6e-6894.81Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPR AHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHV  FDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
        EASFDEGESMNSEPKKQK KNKKKKNKNKKNKRQKIVEDSEC VG KPKKKLRL
Subjt:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]1.8e-6794.7Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPR AHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHV  FDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKK
        EASFDEGESMNSEPKKQK KNKKKKNKNKKNKRQKIVEDSEC VGK P  K
Subjt:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKK
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]3.1e-5986.08Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPR AHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHV  FDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQKIVEDSECCVGKKPKKKLRL
        EASFD+GE+MNSEPKKQKNKNKK KKNKN   KKNKRQKIVEDS C VGK+PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQKIVEDSECCVGKKPKKKLRL
XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]1.5e-5885.81Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPR AHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHV  FDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDPE

Query:  ASFDEGESMNSEPKKQKNKNK--KKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
        ASFD+GE+MNSEPKKQKNKNK  KK  K KKNKRQKIVEDS C VGK+PKKKL+L
Subjt:  ASFDEGESMNSEPKKQKNKNK--KKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]4.8e-6094.85Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPR AHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHV  FDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKI
        EASFDEGESMNSEPKKQK KNKKKKNKNKKNKRQK+
Subjt:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKI
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein7.9e-6994.81Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPR AHPGGPLKTNKAAALAKFLHRKL+QDPNA SSINPQILDLAVRNAKASVHSSGTNIRHV  FDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
        EASFDEGESMNSEPKKQK KNKKKKNKNKKNKRQKIVEDSEC VG KPKKKLRL
Subjt:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
A0A1S3AY37 uncharacterized protein LOC1034838328.8e-6894.7Show/hide
Query:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP
        MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPR AHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHV  FDDP
Subjt:  MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKK
        EASFDEGESMNSEPKKQK KNKKKKNKNKKNKRQKIVEDSEC VGK P  K
Subjt:  EASFDEGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKK
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X13.7e-5885.53Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPR AHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHV  FDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQ-KIVEDSECCVGKKPKKKLRL
        EASFD+GE+MNSEPKKQKNKNKK KKNKN   KKNKRQ KIVEDS C VGK+PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQ-KIVEDSECCVGKKPKKKLRL
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X21.5e-5986.08Show/hide
Query:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPR AHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHV  FDDP
Subjt:  VMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDP

Query:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQKIVEDSECCVGKKPKKKLRL
        EASFD+GE+MNSEPKKQKNKNKK KKNKN   KKNKRQKIVEDS C VGK+PKKKL+L
Subjt:  EASFDEGESMNSEPKKQKNKNKK-KKNKN---KKNKRQKIVEDSECCVGKKPKKKLRL
A0A6J1IUT6 uncharacterized protein LOC1114794947.4e-5985.81Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDPE
        MEDL+EEERRALRGSKFAPLPSQ TSSRSHPR AHPGGPLKTNKAAALAKFL RKLHQDPN  SSINPQIL+LAVRNAKASV  SSGTNIRHV  FDDPE
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-HSSGTNIRHVHAFDDPE

Query:  ASFDEGESMNSEPKKQKNKNK--KKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
        ASFD+GE+MNSEPKKQKNKNK  KK  K KKNKRQKIVEDS C VGK+PKKKL+L
Subjt:  ASFDEGESMNSEPKKQKNKNK--KKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein2.2e-3155.83Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVHAF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PR AHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVHAF

Query:  DDPEASFD----EGESMNSEPKKQKNKNKKKKNKNKKNK--RQKIVEDSECCVGKKPKKKLRL
        +D E S D    E   +N + KK+  K KK++ K KKNK  +Q+I  D +  + K+P KKL+L
Subjt:  DDPEASFD----EGESMNSEPKKQKNKNKKKKNKNKKNK--RQKIVEDSECCVGKKPKKKLRL
AT5G18540.2 unknown protein9.0e-3356.52Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVHAF
        E+LTE+E+RALRGSKFAPL S  +SSRS  PR AHPGGPLKTNKAAALAKFL RKL QDPN  +SI+P +++LAV+NAK +V      SSG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSH-PRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASV-----HSSGTNIRHVHAF

Query:  DDPEASFD----EGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL
        +D E S D    E   +N + KK+  K KK++ K KKNK+ KI  D +  + K+P KKL+L
Subjt:  DDPEASFD----EGESMNSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGGAAGATCTTACCGAAGAAGAAAGACGTGCTTTACGCGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTCGCTCA
TCCAGGTGGACCATTGAAGACCAACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGG
ACCTTGCTGTTCGTAATGCCAAAGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGCACGCATTTGATGATCCTGAGGCTTCTTTTGATGAAGGGGAATCTATG
AATTCTGAGCCTAAAAAACAAAAGAACAAGAACAAGAAGAAGAAAAACAAGAATAAGAAGAATAAAAGGCAAAAGATTGTCGAGGACTCCGAGTGTTGCGTTGGGAAAAA
ACCCAAAAAGAAGTTGAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
TAAACACTCTTTAAATTTTTATTGAAAAATTATTTTAAATGATAAAACTTTCGAAAATATTTACAAAATATCACAATCTAATTGTAATACACCATGACTAACTTCGGTTC
ATCGTAGATAGACTGGTATTCCGCTTTGTTCATTATGTTATATTTGAAAACCATACTTTTTTTTTTTTAAGACTAGGTTTTTTATTTTTATTAAAAAAATAGAGAGAAAG
AAAAAGGAATTTACTGGTTCGACACGTCGTTCACGTGGAGGCTCCCTCCAACGGGACGACAAAACGACTTTCCCTCTCATCCCCCAAAGAGAAGAAAAGAAGCGACGGAC
GATGTCGTAAAATCTGCACAAAGCAAAAAAAGAACAGAATTCAAATTTCTGAAAGAATAAGAAAAAAAAAAAGAGAAAATCCATAGCCATGGTGATGGAAGATCTTACCG
AAGAAGAAAGACGTGCTTTACGCGGAAGCAAGTTCGCTCCTCTCCCATCGCAATCCACTTCTTCTCGATCTCACCCAAGGTTCGCTCATCCAGGTGGACCATTGAAGACC
AACAAAGCCGCGGCTCTCGCTAAGTTTCTTCACCGGAAATTGCACCAAGATCCTAATGCTTTCTCTTCTATTAATCCCCAGATTTTGGACCTTGCTGTTCGTAATGCCAA
AGCCTCTGTTCATTCCAGTGGTACAAATATTCGGCATGTGCACGCATTTGATGATCCTGAGGCTTCTTTTGATGAAGGGGAATCTATGAATTCTGAGCCTAAAAAACAAA
AGAACAAGAACAAGAAGAAGAAAAACAAGAATAAGAAGAATAAAAGGCAAAAGATTGTCGAGGACTCCGAGTGTTGCGTTGGGAAAAAACCCAAAAAGAAGTTGAGATTG
TGAGCTGAAAGGGAAGGAAACACAACCGGAGATATTCAGTTTTCAGAAGATTGGAGAATCAACTTGAAAGGATGAACCTTTTTGGAAGCAAGGCAGCTAGTAAGCCCTAT
AGGGTTGCTGTTCCTGATCCTACAGGGTTGCTGTTCCTGATATTTTTGAACAACGATTACTATAAAGTCTCATCATATTCACGAGTCAAACTATTTGATTTATCTAGTGA
AAGAATGATGTTTAGCTTCTCTTACTCATGTTGCAACATTCTTTTTTTTTTGTTGGCGAATTGCAACTTCTTGAATTCGATTGTTAGTATGAGAAGTCTTTTCCATATGT
GTTCATTCATGGTTTCTATCGCTTAAATGCCACTTCTACTCATTTGACAAA
Protein sequenceShow/hide protein sequence
MVMEDLTEEERRALRGSKFAPLPSQSTSSRSHPRFAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHSSGTNIRHVHAFDDPEASFDEGESM
NSEPKKQKNKNKKKKNKNKKNKRQKIVEDSECCVGKKPKKKLRL