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PI0027709 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027709
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTetratricopeptide repeat protein 27-like protein
Genome locationchr02:6728963..6732306
RNA-Seq ExpressionPI0027709
SyntenyPI0027709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032517.1 tetratricopeptide repeat protein 27-like protein [Cucumis melo var. makuwa]1.3e-0987.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
TYJ98349.1 tetratricopeptide repeat protein 27-like protein [Cucumis melo var. makuwa]1.3e-0987.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
XP_008455815.1 PREDICTED: tetratricopeptide repeat protein 27 homolog [Cucumis melo]1.3e-0987.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
XP_011650024.1 tetratricopeptide repeat protein 27 homolog isoform X2 [Cucumis sativus]2.3e-0985Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KF+KFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
XP_031736747.1 tetratricopeptide repeat protein 27 homolog isoform X1 [Cucumis sativus]2.3e-0985Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KF+KFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
TrEMBL top hitse value%identityAlignment
A0A0A0LQK0 TPR_REGION domain-containing protein1.1e-0985Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KF+KFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
A0A1S3C1C8 tetratricopeptide repeat protein 27 homolog6.5e-1087.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
A0A5A7ST37 Tetratricopeptide repeat protein 27-like protein6.5e-1087.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
A0A5D3BH33 Tetratricopeptide repeat protein 27-like protein6.5e-1087.5Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKD++KFIKFAQASLELSRVY HIS TANSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
A0A6J1KU59 tetratricopeptide repeat protein 27 homolog1.9e-0985Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GSDLWKDKD+FIKFAQASLEL RVY HIS T NSQRELY
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17270.1 Protein prenylyltransferase superfamily protein1.8e-0760Show/hide
Query:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        +GS++WKDK++F KFA+ASLEL RVY  IS +  S+REL+
Subjt:  EGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
AT5G37130.1 Protein prenylyltransferase superfamily protein8.7e-0758.97Show/hide
Query:  GSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY
        G ++WKDK++F KFA+ASLEL RVY  IS +  S+REL+
Subjt:  GSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCTCACGCGACTGGGAGAGGGAGGAACTGGCTCAGGCATGGCTGGTGTCGACTCAAGGCAAACGAGAATGACTCAGGTTATGGAGATCAAATTAAGAAAGAA
TGGCTCTTGGTTTGGCACGGCTCGGACGGATAAGGGATCGGTGCAGACAACTGACCATGACTCGAAGCTTGACGGAAACAAAACGAAAGAGACGACACGAAATGAAGGCG
GGTGGAGACGATGCGAAACAAAGACGACGCGAGACGAAGAGCGACGGAACCAGTCAGCTTCGTCTGCATGTTCGGTTCGGCGGCGCACGACGATGGGAGACACAACGACG
GCAAGCAACAGAGAGGTCGCGACAGCTAGGTCATGGGAAGAGGAAGAAGATGACAGTGGGGCACTCAATTCGGTGAGAACATCTCTCCCTCAACTCTATCCCTTTCACGA
ATTCACTCTCATCTCAAACCTGAGCATAAGATACAGAAGGGCCCTCCTTAATGAGCGATGGGAGATAGTCGAAGAGATCAAACTGCCGTTTCAACTTAAGGAGGAAGAGA
CCCAATTTGCCCAGAGGTCCCATTCTTCTATCCTTTCCAAGGAGTCGATGACTATTCATAGCTATTACCTTGACACCAAAGAAGAGTTCGACCCAATGCTTATTTATGTC
CTAGTTGATCTTGATTCGACATTAGAAGGTTCAGATCTTTGGAAAGATAAGGATAAGTTCATAAAGTTTGCACAAGCTTCATTGGAACTAAGCAGGGTCTACACGCATAT
ATCATTGACTGCAAATAGTCAGCGAGAACTATATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCTCACGCGACTGGGAGAGGGAGGAACTGGCTCAGGCATGGCTGGTGTCGACTCAAGGCAAACGAGAATGACTCAGGTTATGGAGATCAAATTAAGAAAGAA
TGGCTCTTGGTTTGGCACGGCTCGGACGGATAAGGGATCGGTGCAGACAACTGACCATGACTCGAAGCTTGACGGAAACAAAACGAAAGAGACGACACGAAATGAAGGCG
GGTGGAGACGATGCGAAACAAAGACGACGCGAGACGAAGAGCGACGGAACCAGTCAGCTTCGTCTGCATGTTCGGTTCGGCGGCGCACGACGATGGGAGACACAACGACG
GCAAGCAACAGAGAGGTCGCGACAGCTAGGTCATGGGAAGAGGAAGAAGATGACAGTGGGGCACTCAATTCGGTGAGAACATCTCTCCCTCAACTCTATCCCTTTCACGA
ATTCACTCTCATCTCAAACCTGAGCATAAGATACAGAAGGGCCCTCCTTAATGAGCGATGGGAGATAGTCGAAGAGATCAAACTGCCGTTTCAACTTAAGGAGGAAGAGA
CCCAATTTGCCCAGAGGTCCCATTCTTCTATCCTTTCCAAGGAGTCGATGACTATTCATAGCTATTACCTTGACACCAAAGAAGAGTTCGACCCAATGCTTATTTATGTC
CTAGTTGATCTTGATTCGACATTAGAAGGTTCAGATCTTTGGAAAGATAAGGATAAGTTCATAAAGTTTGCACAAGCTTCATTGGAACTAAGCAGGGTCTACACGCATAT
ATCATTGACTGCAAATAGTCAGCGAGAACTATATCCATAG
Protein sequenceShow/hide protein sequence
MAWLTRLGEGGTGSGMAGVDSRQTRMTQVMEIKLRKNGSWFGTARTDKGSVQTTDHDSKLDGNKTKETTRNEGGWRRCETKTTRDEERRNQSASSACSVRRRTTMGDTTT
ASNREVATARSWEEEEDDSGALNSVRTSLPQLYPFHEFTLISNLSIRYRRALLNERWEIVEEIKLPFQLKEEETQFAQRSHSSILSKESMTIHSYYLDTKEEFDPMLIYV
LVDLDSTLEGSDLWKDKDKFIKFAQASLELSRVYTHISLTANSQRELYP