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PI0027719 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027719
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:21357800..21358084
RNA-Seq ExpressionPI0027719
SyntenyPI0027719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650876.1 hypothetical protein Csa_002497, partial [Cucumis sativus]4.6e-0550.72Show/hide
Query:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
        E++E       N E+ANL LNSL   N SK +KI G I G EVVVLI+GG  +NF  EEVV  LK  ++
Subjt:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
XP_031737572.1 uncharacterized protein LOC116402461 [Cucumis sativus]4.6e-0550.72Show/hide
Query:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
        E++E       N E+ANL LNSL   N SK +KI G I G EVVVLI+GG  +NF  EEVV  LK  ++
Subjt:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
TrEMBL top hitse value%identityAlignment
A0A5D3CTU6 Ty3-gypsy retrotransposon protein5.4e-0446.38Show/hide
Query:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
        E++E    +  N E+ANL LNSL   +  K +KI G I G E+VVLI+GG  +NF  +EVV  LK  I+
Subjt:  EDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGG-VYNFNYEEVVTNLKTPID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGTCGAGAAATTTGAAGAAAAGGTAGAGAATGGAGAGGTTGCAAATCTGCCCCTAAATTCCTTAGCCGAATTTAACCCTTCGAAAATTTTGAAGATCATAGG
GACAATTCATGGACACGAGGTTGTGGTGCTGATAAATGGAGGAGTGTATAATTTCAACTATGAGGAGGTGGTTACTAACTTGAAAACTCCAATCGATGAAACAAAAATCA
TGGAGTCGTCCTCGAAACTAGAGGAGTTGTGCGCATGGCTGAGATTTGTAAGGGGTACGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGTCGAGAAATTTGAAGAAAAGGTAGAGAATGGAGAGGTTGCAAATCTGCCCCTAAATTCCTTAGCCGAATTTAACCCTTCGAAAATTTTGAAGATCATAGG
GACAATTCATGGACACGAGGTTGTGGTGCTGATAAATGGAGGAGTGTATAATTTCAACTATGAGGAGGTGGTTACTAACTTGAAAACTCCAATCGATGAAACAAAAATCA
TGGAGTCGTCCTCGAAACTAGAGGAGTTGTGCGCATGGCTGAGATTTGTAAGGGGTACGTATTAA
Protein sequenceShow/hide protein sequence
MEDVEKFEEKVENGEVANLPLNSLAEFNPSKILKIIGTIHGHEVVVLINGGVYNFNYEEVVTNLKTPIDETKIMESSSKLEELCAWLRFVRGTY