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PI0027720 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027720
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal protein S19
Genome locationchr03:4698498..4700314
RNA-Seq ExpressionPI0027720
SyntenyPI0027720
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002222 - Ribosomal protein S19/S15
IPR005732 - Ribosomal protein S19, bacterial-type
IPR020934 - Ribosomal protein S19 conserved site
IPR023575 - Ribosomal protein S19/S15, superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064877.1 ribosomal protein S19 [Cucumis melo var. makuwa]2.9e-4494.68Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK
        MSPRSIWKGGFVDAFL+KMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNG+NFVRCKITEGRVGHKFGEFAMTRKRRI+R NSAPAK+GGKK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK

KAE8652214.1 hypothetical protein Csa_022320 [Cucumis sativus]1.1e-3890.8Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAP
        MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNG+NF+RCKITE RVGHKFGEFAMTRKR+I+R NSAP
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAP

YP_003587264.1 ribosomal protein S19 [Citrullus lanatus]1.8e-3377.17Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGG
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KKGG
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGG

YP_003587364.1 ribosomal protein S19 [Cucurbita pepo]2.0e-3275.27Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KK G+
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK

YP_003587380.1 ribosomal protein S19 [Cucurbita pepo]2.0e-3275.27Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KK G+
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK

TrEMBL top hitse value%identityAlignment
A0A0A0LPU9 Uncharacterized protein6.6e-4289.36Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK
        MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNG+NF+RCKITE RVGHKFGEFAMTRKR+I+R NSAP K+GGKK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK

A0A5A7VCX8 Ribosomal protein S191.4e-4494.68Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK
        MSPRSIWKGGFVDAFL+KMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNG+NFVRCKITEGRVGHKFGEFAMTRKRRI+R NSAPAK+GGKK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK

D5I3D4 Ribosomal protein S198.6e-3477.17Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGG
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KKGG
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGG

D5I3F0 Ribosomal protein S199.5e-3375.27Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KK G+
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK

D5I3G6 Ribosomal protein S199.5e-3375.27Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK
        M  RSIWKG FVDAFLL+MKK  +PL+NRKIWSR S ILPEFV S+VR+YNG+ FVRCKITEGRVGHKFGEFA+TRKRR+SR N  P KK G+
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGK

SwissProt top hitse value%identityAlignment
A5FZW1 30S ribosomal protein S191.0e-1554.55Show/hide
Query:  RSIWKGGFVDAFLLKMKKNVEPLMNR----KIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTR
        RS+WKG FVD ++L  K +      R    KIWSR S ILP+FVG T  VYNGR F+  ++TE  VGHKFGEF+ TR
Subjt:  RSIWKGGFVDAFLLKMKKNVEPLMNR----KIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTR

B6IRR0 30S ribosomal protein S191.7e-1552.63Show/hide
Query:  RSIWKGGFVDAFLLKMKKNVEPLMNR---KIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTR
        RS+WKG FVD +LLK  +           KIWSR S ILP+FVG T  VYNG+ F+   +TE  +GHKFGEF+ TR
Subjt:  RSIWKGGFVDAFLLKMKKNVEPLMNR---KIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTR

P26874 Ribosomal protein S19, mitochondrial1.4e-1754.65Show/hide
Query:  RSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAK
        RSIWKG FVD  L K KK     +  +IWSR S ILP+FVG   ++YNG+ FV  KITE  VGHKFGEFA TRK       + P+K
Subjt:  RSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAK

P27527 Ribosomal protein S19, mitochondrial1.6e-3272.34Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK
        M  RSIWKG FVDAFLL+MKK  + L NRKIWSR S ILPEFV   VR+YNG+ FVRCKITEG+VGHKFGEFA TRKRR SR N  P +K GKK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK

P39697 40S ribosomal protein S19, mitochondrial7.8e-2470.13Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK
        M  RS+WK  FVDAFL+K KKN    +NRKIWSR S ILPE+V S VR+YNG+  VRCKITEG+VGHKFGEFA TRK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK

Arabidopsis top hitse value%identityAlignment
AT5G09490.1 Ribosomal protein S19 family protein8.3e-0540.91Show/hide
Query:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK
        R  +I+PE +GS + VYNG+ F + +I    +GH   EF++T K
Subjt:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK

AT5G09500.1 Ribosomal protein S19 family protein2.4e-0438.64Show/hide
Query:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK
        R  +I+PE +GS + VYNG+ F + +I    +GH   EF+++ K
Subjt:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK

AT5G47320.1 ribosomal protein S195.5e-2570.13Show/hide
Query:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK
        M  RS+WK  FVDAFL+K KKN    +NRKIWSR S ILPE+V S VR+YNG+  VRCKITEG+VGHKFGEFA TRK
Subjt:  MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRK

AT5G63070.1 Ribosomal protein S19 family protein2.4e-0442.22Show/hide
Query:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKR
        R  +I+PE +GS V V+NG+ F    I    +GH   EF+MT K+
Subjt:  RGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKR

ATCG00820.1 ribosomal protein S192.8e-0837.33Show/hide
Query:  RSIWKGGFVDAFLLKMKKNVEPLMNRKI---WSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMT
        RS+ K  FV   LL+  + +     ++I   WSR S I+P  +G T+ ++NGR  +   I +  VGHK GEF+ T
Subjt:  RSIWKGGFVDAFLLKMKKNVEPLMNRKI---WSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCACGGTCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGTTGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTAT
GATTCTGCCCGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGAAGAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCACAAATTTGGAGAGTTTGCTA
TGACACGGAAACGAAGAATTTCGAGACCAAATAGTGCACCCGCTAAAAAGGGGGGGAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
CAACAATATAAGCCCAATGTTTTAACTAAAAATAAAAAATAAAAAAGGAAACCCTAGATTCCACAATTCTTTCATCTTCTTCCTCGACCCTCACATCTCTGCTTTTCACA
AATCTCTAATCTTCATTCTTCACAGTGTCATCTTTCTCTTCGTTCATGTCGCCACGGTCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGTTGAAAATGAAGAAGAA
TGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTATGATTCTGCCCGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGAAGAAATTTTGTTCGTTGTA
AGATCACTGAAGGAAGGGTTGGTCACAAATTTGGAGAGTTTGCTATGACACGGAAACGAAGAATTTCGAGACCAAATAGTGCACCCGCTAAAAAGGGGGGGAAAAAGTAA
AGTCTAAGCGCATATGCCATTTCGTATTCACTCTTTCTTTCTTATTCTCAATTCAAGGTGATGTCCGCCTCGTTCTTGCTCATCTTGGCATAGCTCTGCTTACATTCTCA
TCGGCGAATATGACGTATGGGCTTTGATGGGTCGGTGCCATTGTAGGCCATCAGTTGCCGAGGTGTAAGCTCTGGGGGAAATTTATCAGAATGAGGAACGGTAGCTTCAG
TTGAAATGGTGAAGGCAAAGGATTTTGGATATGTCCCATTTTGAATAATTTGAATTAATAACCCTACACGAATGAGAAATACTTATTGCTGCATCTCGGTTTGCTTTATC
TTTATATAAATCAACTAATAGTTGAATCCTAATTTGTCCTAACTCAGAAAATTGGAGAAATTATTTTAAATGATAAAACTTTTGAAAA
Protein sequenceShow/hide protein sequence
MSPRSIWKGGFVDAFLLKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGRNFVRCKITEGRVGHKFGEFAMTRKRRISRPNSAPAKKGGKK