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PI0027733 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027733
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:12993259..12993723
RNA-Seq ExpressionPI0027733
SyntenyPI0027733
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]1.5e-5072.18Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYR GRQFGFYQD+PNDIGG+ P  T  N L+HWRICTRR TL ELY+P  SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAI PPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+I L+EAMAP  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.4e-5172.93Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPY+F RQFGFYQD+PNDIGG+ P  T  N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAIPPPSQ +LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRG N+G K+IRL+EAMAP  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.9e-5475.94Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+IRL+EAMAP  +  VKE+K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.1e-5174.05Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N L+HWRIC RR TLSELY+P  SLEP KHVT RF +WW TKH  YFEDNRHHLVSSAIPPPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKS
        KNRGSN+G K+IRL+EAMAP  +  V E +S
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKS

KAA0054204.1 hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa]1.8e-5172.18Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSY+PYRFGRQFGFYQD+PN IGG+ P     N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSS IPPPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+IRL+EAM P  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein6.7e-5272.93Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPY+F RQFGFYQD+PNDIGG+ P  T  N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAIPPPSQ +LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRG N+G K+IRL+EAMAP  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

A0A5A7TX42 Uncharacterized protein1.9e-5475.94Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+IRL+EAMAP  +  VKE+K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

A0A5A7UGA8 Uncharacterized protein8.8e-5272.18Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSY+PYRFGRQFGFYQD+PN IGG+ P     N L+HWRICTRR TLSELY+PA SLEP KHVT RF +WW TKH TYFEDNRHHLVSS IPPPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+IRL+EAM P  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

A0A5A7UGW6 PMD domain-containing protein5.2e-5274.05Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N L+HWRIC RR TLSELY+P  SLEP KHVT RF +WW TKH  YFEDNRHHLVSSAIPPPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKS
        KNRGSN+G K+IRL+EAMAP  +  V E +S
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKS

E5GCB9 PMD domain-containing protein7.4e-5172.18Show/hide
Query:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP
        TSYSPYR GRQFGFYQD+PNDIGG+ P  T  N L+HWRICTRR TL ELY+P  SLEP KHVT RF +WW TKH TYFEDNRHHLVSSAI PPSQP+LP
Subjt:  TSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQPKLP

Query:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA
        KNRGSN+G K+I L+EAMAP  +  VKE K  +
Subjt:  KNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACTTATCATCTCGCTGTGGAAATATTTGGATCAAACATCATACAGTCCATATCGGTTTGGGCGGCAGTTTGGCTTTTACCAGGATATCCCTAACGATATAGGGGG
TATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACCTTATCTGAGTTATACATGCCTGCCTGTTCATTAGAGCCTAGCA
AACATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCC
AAACTACCCAAGAATCGAGGAAGCAATGTGGGTAGCAAACAGATCCGCTTGATTGAGGCAATGGCTCCTATCCATGATAGAGGGGTCAAGGAACAAAAGAGTAGAGCGAT
AGCAGTAGAAGCGACCGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTACTTATCATCTCGCTGTGGAAATATTTGGATCAAACATCATACAGTCCATATCGGTTTGGGCGGCAGTTTGGCTTTTACCAGGATATCCCTAACGATATAGGGGG
TATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACCTTATCTGAGTTATACATGCCTGCCTGTTCATTAGAGCCTAGCA
AACATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCC
AAACTACCCAAGAATCGAGGAAGCAATGTGGGTAGCAAACAGATCCGCTTGATTGAGGCAATGGCTCCTATCCATGATAGAGGGGTCAAGGAACAAAAGAGTAGAGCGAT
AGCAGTAGAAGCGACCGTCATTTGA
Protein sequenceShow/hide protein sequence
MLLIISLWKYLDQTSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHHWRICTRRRTLSELYMPACSLEPSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPPSQP
KLPKNRGSNVGSKQIRLIEAMAPIHDRGVKEQKSRAIAVEATVI