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PI0027739 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0027739
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr08:5400651..5401627
RNA-Seq ExpressionPI0027739
SyntenyPI0027739
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]6.4e-2739.68Show/hide
Query:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPT
        FY A +N +E   E+  K V F  +AINALY L N+    G +   +P  R  ++ALE I WPG  W+  PT KYQL+ + L TE S+WL FIKK I PT
Subjt:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPT

Query:  RHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIPGGLCNQMALNSMITFHGHK
        RHDSTI++E  MLLY      + N  ++    +++ ++ P GA PF    + L +K  P L     + +  G+C    L+  IT H +K
Subjt:  RHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIPGGLCNQMALNSMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]2.8e-3050Show/hide
Query:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E IN LYDLPND    PGQ  +V      A++ +++I WP      TPT + QL+ HQLT EA++WLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN
         KK  NLG ++    LS MR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-3549.42Show/hide
Query:  KFYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTG-KYQLYLHQLTTEASMWLFFIKKKIF
        KFY  K N  +  + I  +   FN E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P   +YQLY H LTT+A++W+FF K KIF
Subjt:  KFYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTG-KYQLYLHQLTTEASMWLFFIKKKIF

Query:  PTRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIP
        PT +DSTI+++  ++LYCIM KK +NL ++I   IL+ M  PK AMPFPS +E LC+K +P L       IP
Subjt:  PTRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]2.8e-3050Show/hide
Query:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E IN LYDLPND    PGQ  +V      A++ +++I WP      TPT + QL+ HQLT EA++WLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN
         KK  NLG ++    LS MR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]1.1e-2647.95Show/hide
Query:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAET-PGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFP
        FY AK +++E  V +  K VSF  E IN LY L ND ++ P Q  +  PT+  +R  +++IAW G  W  T T   QLY HQLTTEA++WL FIKKKI P
Subjt:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAET-PGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFP

Query:  TRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMP
          +DST+ +E  +LLYC M K+  NLG ++    L LMR  KGA P
Subjt:  TRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMP

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase1.3e-3050Show/hide
Query:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E IN LYDLPND    PGQ  +V      A++ +++I WP      TPT + QL+ HQLT EA++WLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN
         KK  NLG ++    LS MR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN

A0A5A7V6M5 Gag/pol protein6.2e-3649.42Show/hide
Query:  KFYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTG-KYQLYLHQLTTEASMWLFFIKKKIF
        KFY  K N  +  + I  +   FN E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P   +YQLY H LTT+A++W+FF K KIF
Subjt:  KFYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTG-KYQLYLHQLTTEASMWLFFIKKKIF

Query:  PTRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIP
        PT +DSTI+++  ++LYCIM KK +NL ++I   IL+ M  PK AMPFPS +E LC+K +P L       IP
Subjt:  PTRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIP

A0A5D3CVL7 Uncharacterized protein1.3e-3050Show/hide
Query:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E IN LYDLPND    PGQ  +V      A++ +++I WP      TPT + QL+ HQLT EA++WLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINALYDLPND-AETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN
         KK  NLG ++    LS MR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  TKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVV-PFLCAINSIPIPGGLCN

A0A5D3CW17 Uncharacterized protein3.1e-2739.68Show/hide
Query:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPT
        FY A +N +E   E+  K V F  +AINALY L N+    G +   +P  R  ++ALE I WPG  W+  PT KYQL+ + L TE S+WL FIKK I PT
Subjt:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFPT

Query:  RHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIPGGLCNQMALNSMITFHGHK
        RHDSTI++E  MLLY      + N  ++    +++ ++ P GA PF    + L +K  P L     + +  G+C    L+  IT H +K
Subjt:  RHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIPGGLCNQMALNSMITFHGHK

A0A5D3DES7 Uncharacterized protein5.3e-2747.95Show/hide
Query:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAET-PGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFP
        FY AK +++E  V +  K VSF  E IN LY L ND ++ P Q  +  PT+  +R  +++IAW G  W  T T   QLY HQLTTEA++WL FIKKKI P
Subjt:  FYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAET-PGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIFP

Query:  TRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMP
          +DST+ +E  +LLYC M K+  NLG ++    L LMR  KGA P
Subjt:  TRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCGTACCTGAGCGAGAAAGTGGCGGTGCTCCCCGCGAAGGTGAAAACATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTCGAGGACGAGCTGGA
GGCAATGAGCCCACTTGATCAAGGGCCACCGCCAAGAAAACCAAGGAAGGTCGCCGAACCATCCAAAGGAAAGAAAAAGATTGGGCGTTATGGACTTGAAGAGCGCCCAT
CAGGCGGCGAAACCATTACCAAAACACCCTCCATCAACTCCCTCATCAAGGTTGAGAAAGGACTTCCTCTACGCGTCCATCCAGGCGTTTGGGTGGAAGCAATTCTTAAA
AGGGCACACCAAGTTAAGATTTGGGGTAGTGGAAAATTCTACGTGGCTAAACTTAATGCTGATGAGTTTAGCGTGGAAATCAGTGGCAAGATAGTCAGCTTCAACGCGGA
GGCCATCAACGCGTTATATGATTTGCCTAATGATGCTGAAACGCCTGGGCAAATATACGTGGTTAGCCCCACAAGAAGGATGGCTCGTGAAGCGTTGGAAGTAATCGCAT
GGCCTGGGCCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAGCTCTATCTACACCAGCTGACCACAGAGGCGAGCATGTGGCTTTTCTTCATAAAAAAGAAGATCTTC
CCAACGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGACGAAAAAGCGCGTCAACCTTGGCGATCTGATAATCACATGCATTCTGTC
CTTGATGCGAGCTCCTAAGGGTGCCATGCCATTCCCATCCACCATTGAAGCCCTTTGCGTTAAGGTCGTGCCATTCCTCTGCGCCATCAATTCAATTCCAATCCCAGGCG
GTTTGTGCAACCAAATGGCTTTGAATAGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCGTACCTGAGCGAGAAAGTGGCGGTGCTCCCCGCGAAGGTGAAAACATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTCGAGGACGAGCTGGA
GGCAATGAGCCCACTTGATCAAGGGCCACCGCCAAGAAAACCAAGGAAGGTCGCCGAACCATCCAAAGGAAAGAAAAAGATTGGGCGTTATGGACTTGAAGAGCGCCCAT
CAGGCGGCGAAACCATTACCAAAACACCCTCCATCAACTCCCTCATCAAGGTTGAGAAAGGACTTCCTCTACGCGTCCATCCAGGCGTTTGGGTGGAAGCAATTCTTAAA
AGGGCACACCAAGTTAAGATTTGGGGTAGTGGAAAATTCTACGTGGCTAAACTTAATGCTGATGAGTTTAGCGTGGAAATCAGTGGCAAGATAGTCAGCTTCAACGCGGA
GGCCATCAACGCGTTATATGATTTGCCTAATGATGCTGAAACGCCTGGGCAAATATACGTGGTTAGCCCCACAAGAAGGATGGCTCGTGAAGCGTTGGAAGTAATCGCAT
GGCCTGGGCCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAGCTCTATCTACACCAGCTGACCACAGAGGCGAGCATGTGGCTTTTCTTCATAAAAAAGAAGATCTTC
CCAACGCGCCATGATAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGACGAAAAAGCGCGTCAACCTTGGCGATCTGATAATCACATGCATTCTGTC
CTTGATGCGAGCTCCTAAGGGTGCCATGCCATTCCCATCCACCATTGAAGCCCTTTGCGTTAAGGTCGTGCCATTCCTCTGCGCCATCAATTCAATTCCAATCCCAGGCG
GTTTGTGCAACCAAATGGCTTTGAATAGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGTGA
Protein sequenceShow/hide protein sequence
MLAYLSEKVAVLPAKVKTLEPERNLEVIAEELEDELEAMSPLDQGPPPRKPRKVAEPSKGKKKIGRYGLEERPSGGETITKTPSINSLIKVEKGLPLRVHPGVWVEAILK
RAHQVKIWGSGKFYVAKLNADEFSVEISGKIVSFNAEAINALYDLPNDAETPGQIYVVSPTRRMAREALEVIAWPGPAWEVTPTGKYQLYLHQLTTEASMWLFFIKKKIF
PTRHDSTINLESAMLLYCIMTKKRVNLGDLIITCILSLMRAPKGAMPFPSTIEALCVKVVPFLCAINSIPIPGGLCNQMALNSMITFHGHKEMER