CuGenDBv2

Gene ID	PI0027751
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Photosystem II D2 protein
Genome location	tig00003624:315106..316162
RNA-Seq Expression	PI0027751
Synteny	PI0027751
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR005868 - Photosystem II D2 protein IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AMX21683.1 photosystem II protein D2 [Iochroma parvifolium]

3.5e-163

81.82

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKA
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRGKA
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKA

QSQ72391.1 photosystem II protein D2 [Duranta erecta]

2.7e-163

81.87

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        DLTRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

QVL23588.1 photosystem II protein D2 [Callicarpa peichieniana]

1.6e-163

81.59

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRDPFVF+GWSGLLLFPCAYFA+GGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

YP_004841778.1 photosystem II protein D2 [Cucumis melo subsp. melo]

3.5e-163

81.87

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

YP_009447530.1 photosystem II protein D2 [Cucurbita moschata]

4.6e-163

81.59

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFD+MDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU03 Photosystem II D2 protein

1.7e-163

81.87

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

A0A1X9Q1C1 Photosystem II D2 protein

1.7e-163

81.87

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

A0A218KG45 Photosystem II D2 protein

1.7e-163

81.87

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

A0A249RZK8 Photosystem II D2 protein

1.7e-163

81.87

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

G3ETY0 Photosystem II D2 protein

1.7e-163

81.87

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

SwissProt top hits

e value

%identity

Alignment

P69685 Photosystem II D2 protein

1.0e-165

81.59

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Q2MIA5 Photosystem II D2 protein

6.0e-166

81.59

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Q2MIJ2 Photosystem II D2 protein

6.0e-166

81.59

Show/hide

Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Q2VEI1 Photosystem II D2 protein

6.0e-166

81.59

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Q4VZN8 Photosystem II D2 protein

4.6e-166

81.87

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIAVGKFTKDENDLFDIMDDWLRRD FVF+GWSGLLLFPCAYFAVGGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLWTF+ALHGAFGL+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

1.9e-18

23.38

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Query:  VFLGWSGLLLFPCAYFAVG----GWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQGDLTRWCQLGGLWTFLALHGAFGLL
        +++GW G+L+ P    A       +              ++ S L G N ++ A+   + ++    + +W       +  W   GG +  + LH   G+ 
Subjt:  VFLGWSGLLLFPCAYFAVG----GWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQGDLTRWCQLGGLWTFLALHGAFGLL

Query:  ----------------------------------------------NLTFGVAAIFRFILFFQGFHNWTLNPLNMMGVAGVLGAALLCAIHGATVENTLF
                                                       +  G++  F F++ FQ  HN  ++P +M+GVAGV G +L  A+HG+ V ++L 
Subjt:  ----------------------------------------------NLTFGVAAIFRFILFFQGFHNWTLNPLNMMGVAGVLGAALLCAIHGATVENTLF

Query:  -EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF
         E  +  +    +   Q EETY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Subjt:  -EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF

ATCG00270.1 photosystem II reaction center protein D

1.5e-164

80.45

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Query:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG
        MTIA+GKFTKDE DLFDIMDDWLRRD FVF+GWSGLLLFPCAYFA+GGWF G TF+TSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSL LLWGPEAQG
Subjt:  MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQG

Query:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM
        D TRWCQLGGLW F+ALHGAF L+                                                +FGVAAIFRFILFFQGFHNWTLNP +MM
Subjt:  DLTRWCQLGGLWTFLALHGAFGLLNL----------------------------------------------TFGVAAIFRFILFFQGFHNWTLNPLNMM

Query:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
        GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Subjt:  GVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV

Query:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL
        SQEIRAAEDPEFETFYTK ILLN GIRAWMAAQDQPH NLIFPEEVLPRG AL
Subjt:  SQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

Sequences

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CDS sequence

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ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCCTTTCGTTTTTCTAGGTTGGTCCGGTCTATT
GCTCTTTCCTTGTGCCTATTTTGCCGTCGGAGGTTGGTTTAGAGGTAGAACCTTTCTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACT
TCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCCCACTCTTTGTTCTTACTATGGGGCCCTGAAGCACAAGGAGATTTGACTCGTTGGTGTCAATTAGGTGGT
CTGTGGACTTTTCTTGCTCTCCACGGTGCTTTCGGACTGTTGAATCTTACTTTTGGTGTAGCAGCTATATTTCGATTCATCCTATTTTTCCAAGGGTTTCATAATTGGAC
ATTGAACCCATTGAATATGATGGGAGTTGCGGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTG
CAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGT
TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTTGTTTCTCAGGA
AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAAGATTCTCTTAAACTCAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATTCAAACC
TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAAGGCTCTTTAA

mRNA sequence

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Protein sequence

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MTIAVGKFTKDENDLFDIMDDWLRRDPFVFLGWSGLLLFPCAYFAVGGWFRGRTFLTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLFLLWGPEAQGDLTRWCQLGG
LWTFLALHGAFGLLNLTFGVAAIFRFILFFQGFHNWTLNPLNMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKR
WLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKKILLNSGIRAWMAAQDQPHSNLIFPEEVLPRGKAL

PI0027751 (gene) of Melon (PI 482460) v1 genome